Report for 3434.m00220

 > 3434.m00220, length: 517, copies: 1 

MADFYSPSHASRRLSTSITFAGGLDVTSELVIAAVAAALLLVLLFAACACCSWCCRRRSATQRWQNHHAAAFGYQ

GNTTAYYYHHTGGARPQWAATKTGAPSTPPNMMMHPTNMTGPHVVVRPPLVPPPPPLVPAGLDENAFGYDKLAAA

TGGFSEGNMLGQGGFGYVYRGVLGDGKEVAVKQLSAGGGQGEREFQAEVDMISRVHHRHLVPLVGYCIAGAQRLL

VYDFVPNRTLEHHLHEKGLPVMKWTTRLRIAVGSAKGLAYLHEECNPRIIHRDIKSANILLDNNFEPLVADFGMA

KLTSENVTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELLTGRRPADRSSYGADCLVDWARQALPRA

MAAGGGGGYDDIVDPRLRGEYDRAEAARVAACAVACVRHAGRRRPKMSQVVKVLEGDVSPEELGDGARPGQSAMS

SSSGDSSSGSGSYTAQMERVRRTAASPASPEYYSSEYQGYGCPSPASSAGDNASSGEHDNQWRKAHR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	154	353	5e-42
Ser/Thr pkinase [Pfam ls]	154	431	9.4e-34

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	122	351	3e-28
FLS2 [A.thaliana]	131	382	7e-32
Pto [L. esculentum]	142	430	1e-52
Rpg1 [Hordeum vulgare]	142	359	5e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	31	53	out -> in

Report for 3434.m00220

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)