Report for 3444.m00134

 > 3444.m00134, length: 879, copies: 1 

MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIREVKGELESIHAFLQAAERFKDADETTSAFVK

QVRSLALSIEDVVDEFTYELGEGDGRMGMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGA

KSMAGRRSSNWRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSVWGMSGIGKTALVANVYNAIKADFDT

CAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSYLENKRYVLVLDDVWNANVWFDSKD

AFEDGNIGRIILTSRNYDVALLAHETHIINLQPLEKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLP

IAIVCIGRLLSFQGSTYSDWEKVYKNLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKS

LVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEVQMHDILRVLALSKAHEQNFCIVVNH

SRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPNVSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGL

FNLRFLGLRRTKISKLPSSIGRLKILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPL

RICSMTTLQTLLLMEASSQMVHHLGSLVELRTFRISKKLFLQGTLSHESLPHFVSVSNLNNLTFLRLAGSRIDEN

AFLNLEGLQQLVKLQLYDAYDGMNIYFHENSFPKLRILKIWGAPHLNEIKMTKGAVASLTDLKFLLCPNLKQLPC

GIEHVRTLEELTLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	159	466	1.2e-73
NB-ARC [Pfam ls]	159	466	3.2e-74
LRR [Pfam ls]	602	624	0.71

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	579	601	1.8
LRR [sensitive, ls]	579	601	43
LRR [sensitive, ls]	602	624	0.031
LRR [sensitive, ls]	602	624	0.71
LRR [sensitive, ls]	736	759	1.1
LRR [sensitive, ls]	736	759	26

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	752	1e-56
I2 [L. esculentum]	13	656	1e-54
RPM1 [A. thaliana]	27	850	1e-110
Pib [Oryza sativa].	53	322	9e-11
Pi-ta [Oryza sativa]	67	652	2e-50
Xa1 [Oryza sativa]	96	772	2e-30
L6 [L. usitatissimum]	142	507	1e-17
Pib [Oryza sativa].	142	652	9e-54
M [L. usitatissimum]	172	507	3e-18
RPS2 [A. thaliana]	174	824	4e-38

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3444.m00134

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)