Report for 3446.m00121

 > 3446.m00121, length: 904, copies: 1 

MALVAEAMGSLVPKLTELLKEEYKLQTGVREKINFLKSELEDMHAALRKVGSMHPDLLDEQVRIWASKVRELSYD

MEDVIDAFLVRVDGSVPANPGCLERLVHMMCGLFTKIKVRHQISGVVQDINTKLEEVSKARERYIASDLQANLAA

TQLSTHDPRILLSNTDAAKLVGIDGTRNDIIKILSLEGDNLPLGKMIKVSIVGSGGMGKTTLSRAVYDSVKGKFQ

CSAFVPVGQNQDLKRVFMDVLNDLDKEKFDNIHSTKKDVRLLMNEVYDFLENKRYIIVIDDIWKFDAWDMIAKVL

GDSSCGSRVIITTRISEIAEEVGHVYEIKHLSDVDSRRLLHRRILSGEDQCPDDDYDLEEVCDEILRKCEGVPLA

IVTTSSLLESKPREDWSELYRSIALGAKDNRHVDNTMKILSLSFYHLPYHLRTCLLYLSAFPEDYLIEAENEDYI

LGCRVHDMVLGLIRSLSSSENFVTVLGIEQYNTSHQGYGRRIAILSSKNGLPPVVNLGTAQSQVTIRSFSANGLS

YIDVLPTPAKFEAVRVLALQNCESLQDLHGLEHIGSLLHLRYLALTYTPLSELPNGIAGRLRFLETLDLWGTGIE

QVPSSVGKLTQLLCLQADIKTRVPDWIGNLTSLQELWMWPDAAAAGQFVKELGKLEDLRVLCTQFEGAPATDIIE

SLGSLPKIQKMHAFDRWAAVGQCVPWEQGFVTPQCLQFLCLRCLTFTSLPPWINPSLLPNLSNLSLSLQVLRQAD

MEILGRLRMLRRLDLFAMGNAIIRIGIHDTLLFRKLRFCTMATTSIRFVPPPAASAAVTTPVSVMPYLELLHFSL

DVHFFKDRKIAFDIGLEHLPSSLRTVKVFVLCHLAKEEDVKEAEAALLHSVSIHPSRPALQLERLAEDKMLPSHL

KDDQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	155	445	1e-42
NB-ARC [Pfam ls]	155	461	2.2e-40
LRR [Pfam ls]	564	587	4.7
LRR [Pfam ls]	588	610	3.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	538	560	3.5
LRR [sensitive, ls]	538	560	81
LRR [sensitive, ls]	564	587	0.2
LRR [sensitive, ls]	564	587	4.7
LRR [sensitive, ls]	588	610	0.14
LRR [sensitive, ls]	588	610	3.4
LRR [sensitive, ls]	710	731	2
LRR [sensitive, ls]	710	731	47

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	888	1e-120
Pi-ta [Oryza sativa]	8	803	1e-51
RPM1 [A. thaliana]	12	684	6e-42
Pib [Oryza sativa].	62	332	2e-14
I2 [L. esculentum]	129	658	1e-34
M [L. usitatissimum]	169	436	2e-11
N [N. glutinosa]	170	451	2e-13
RPS2 [A. thaliana]	199	612	2e-12
Pib [Oryza sativa].	199	621	1e-35
Xa1 [Oryza sativa]	201	440	4e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3446.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)