Report for 3453.m00146

 > 3453.m00146, length: 772, copies: 1 

MALRARLRRLLVVVILVVVEVVVAQQQQQERLASGSDLAGLFSLRASLGIRAREWPARVDPCGGGWAGVTCRGGR

VVGVTVAGFRRTRVGARAPRFAVDGVRNLTALEVFNASGFPLPGEMPAWFGRGLPPPLAVLDLRSAAVNGTLPPD

LGVSGNLTSLLLSGNSLSGAVPGSLLSVAGLRFLDLSGNNFTGGLPNVTPVAGGGAASLFNVSGNSLYGVVSDAI

GALKGRFQVVDLSSNYFDGVWNVSDGNVDVRMNCFSGAPGQRNRVDCEEFYRRAGVRLGDALAPAPSPETSPGTT

TKNNNSRISKGVLIGVIAAAATLMVVFFGALVFCLARQKAGRRGARGRGVDTNEESTRGVRRRDSSVNPVTSPPV

AVSPSANSGHKDPVVVSGEFTFEQLVHATGGFGDDNLLKHGHSGDIYHGVFESGSQVVVKKVNAQSVNKHAGELD

FYKMYSHERIVPLLGHLAKDEEEFMAYKYMPKGDLTNALHKKPVDTEDGLPSLDWITRLKIATGVAEAMCFLHDE

CRPPLVHRDIQATSVLLDDKFEVRLGSMSDVCAQQSGGSQSVFSRLLRSSRSLDKNISGPPATCSYDVYCFGKVM

LELVTGNFGVSGSNDAASEEWMTNTLNRIDMNDKESISRIIDPLLIVDEDHLEEVWAMAIVAKTCLNSKPSRRPS

ARYVLRALENPLKILRMASRSNSARLRSSSSRSSWQSAFLQGNRYQSLETASSSGQMLDRKHSTRSHGSGGETSF

SFKRASREIAPEPEGFEENVVV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	156	179	1.9
LRR [Pfam ls]	180	200	0.22
Ser/Thr pkinase [Pfam ls]	407	680	3.3e-11
Ser/Thr pkinase [Pfam fs]	416	535	1.2e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	156	179	0.09
LRR [sensitive, ls]	156	179	1.9
LRR [sensitive, ls]	180	200	0.011
LRR [sensitive, ls]	180	200	0.22
LRR [sensitive, ls]	206	229	3.5
LRR [sensitive, ls]	206	229	72

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	33	262	3e-11
FLS2 [A.thaliana]	101	700	2e-22
Xa21 [O. sativa]	101	495	1e-10
Pto [L. esculentum]	392	689	6e-20
Rpg1 [Hordeum vulgare]	394	685	1e-15
Rpg1 [Hordeum vulgare]	394	684	2e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	311	333	in -> out

Report for 3453.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)