Report for 3470.m00171

 > 3470.m00171, length: 693, copies: 2 

MPCVHATSSMHANSIFKCPFYPYVFIGNKEKLLRKNKKKRYLIVIDDVWSISAWEAILSRLPDNKCNSRIIVTTR

IEHVARACRSASLEEEYYIHRVKPLQFEDAKKLFINAVFGPQQDCPEHLKDIMHKILTRCSGLPLAIFCIVRLLA

GYRSPEGAVEMWTRVCNSTGSLMENNPTLNGMRHIITLSYNHLPHHLRACMMYLSLFPEDYVVDKRRLLYRWIAE

GLVSEQRGLTPMEVAESYFAELVNRHMIQPSCTETLGTLMGCRVHDMMLDIIVCKALESNFVSFVGGQCRDPSYG

SVRRLAIQSDDLGSSIENTNLRHVRSLTTFRPQGHRKLLDCLAEFTLLRVLDLQDCKDLQNKHMKHVCQLFLLRF

LSLNGTDITKLPSQMNKLQHLQALWLISTLLVKVPESLVDLEKLEHLGFKNKHDRTILLRLPRHIRKMKALQSLY

RFEFREDDAQLAEEIGDLVQLRVLNVVLNCSNCSEAKVLTELAKSMGRCSQNLCKLFLEDMHFNANNMNFLLELP

SPPKFLRVLYIGGTIDRTPDWVQSLTQLVEIVFWWTNLPSDEIYGVLYKLPNLSKIILGKRCCSEDKLVASGAFK

FPQLKELILGPNDGKPRVFGFEEGAMPKLKTLEMNFHKEDMILDGVQHLTSLKEVRLRGWKHNSALHRAVDQLKA

HSMSRHRSEQLKIIVTYF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	233	5e-11
NB-ARC [Pfam fs]	30	233	7.6e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	29	508	3e-20
RPM1 [A. thaliana]	30	693	8e-47
Mla1 [Hordeum vulgare].	30	554	2e-58
I2 [L. esculentum]	31	547	9e-33
RPS2 [A. thaliana]	31	466	2e-20
Pib [Oryza sativa].	31	660	1e-62
Pi-ta [Oryza sativa]	39	474	1e-59

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3470.m00171

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)