Report for 3491.m00169

 > 3491.m00169, length: 939, copies: 1 

MGVMNPLMAKLTTLMGDEYKKLKGLRKQVSFLKDELTTMSAFLEKLALMDDDDDGELDPLAKDWRNHVREMAYDM

EDCIDDYFTSHLDHRYSSSDAGLIRKIARRLRALRVRHRIASQINELKARVVEANERRVRYRLDDCNNKHGVSAN

PAIDPRITSLYQNAGSLVGIDGPSQELIQLLSLDRDTDQRQLKVVSVVGFGGLGKTTLAKYVYDKIGHQFDCTAF

VSVSHKPDITRILSSIQSKLDIGGTSQACDDVQQLIDDIRAYLEHERYIIIVDDLWKQEAWVIISCAFPNNGKGS

RVIVTTRVKDVARLACGKDGQIYKIQPLNNKDSRKLFFDRVFRPEDSCVLQYEEISTEILKKCSGLPLAIVTVGS

LLACRPRTMEEWKSIRDSLGAPFDKNKSLEGMRNILNLSYKNLPLHLKTCLLYIGKYPEDYEIGRDELVTEWIAE

GIMGNPHGENLEATGNGYFSELINRGLIQPESTGYGGEVLSCKVHDMMLDLILIKCAEDNFVSVAHSCKDYMRMA

MHHERSCNKVRRLSLQCKAARSDCAIEGSVISTSMARARSVSVFGECSRGLPFLMLSKYIRVVHIELEGHGGQVD

LTAISHVLQLRYLRVETPGCEIDLPSKICGLVHLETLSIFSHKAVSRLPSDISSLPRLSVLSLVVPWATRLPNKL

NKLKGSLRSLTILFNPPDALGMEAIGELKNLRDLNISVNRWRDDEILSLYALGSSIGKLDELRSLQIHVPPATLG

DVDLLGSLPIFPQSIERLILHGWCFSKVPRWINGTLRNLQHVLLEVSETSSSEVDLLGELPSLADLELRVGLKTR

DVIAFGGTRASLFPALLKLKLRVGEHVASRLQFQAGVMPKLQSLHLWFRNCESGIHVTPEGMQHLLSLQSICVEI

YLRDEELKATYPWDAMERAFREITGANPNRPSFKFVKQV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	152	458	1.6e-68
NB-ARC [Pfam fs]	166	458	3.9e-68

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	2	931	1e-118
RPM1 [A. thaliana]	8	896	2e-57
I2 [L. esculentum]	16	876	6e-40
Pi-ta [Oryza sativa]	23	821	1e-91
Pib [Oryza sativa].	48	340	1e-20
Xa1 [Oryza sativa]	115	664	1e-32
L6 [L. usitatissimum]	159	435	2e-12
N [N. glutinosa]	166	418	3e-14
RPS2 [A. thaliana]	166	508	2e-26
M [L. usitatissimum]	167	429	9e-14
Pib [Oryza sativa].	172	931	3e-66

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3491.m00169

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)