Report for 3494.m00119

 > 3494.m00119, length: 909, copies: 2 

MEGALVSTATGALKPVLAKLAALLGDKYTIFKGLHKEIKSLSTELMAIHAFLLNMSEEENPDAQDQAWMTEVREL

SYDMEDIIDEFMVHVDDESATPDGFISKCKKSLANMKTKRRIAKAIEDFKSQINIVGERHARYRSEKTICRTSNT

IIDHRALSIFEHASNLVGIEGPKNEVIKLLSDDDGCESKQQHPKVVSVVGFGGLGKTTLAYQVYQQLKGNFSCSV

FVSVSRNPDMMRILRTILSEVTQRDYAVTEAGDEQQLIIKISNFLSKKRYFVVIDDIWNVEIWNIIKGAFSMNSR

CSKIITTTRISDVARSCCSSFRGHLYNIRPLDTVHSRTLFHRRLFNPQEKCPSHLEEVSDQILKKCDGLPLAIIA

ISGLLANKLRTKDQWEHVKNSIGCALERNPTVEGMISILSLSYFDLPPHLKTCLLYLSIFPEDYVIRKNDLILRW

IAEGFIHKEDSNTLYESGEMCFNELVNRNLLQLEKQNYNGCRVHDTVLDFIISMSKKNNFVTLVTSPCLTIEGQN

KIRRLSLQVGSEEGNSIQRTMLSHARSLDVFWLHLQEIPSLVEFRHLRVLSFQGCRWLQSQHLANIGKLFQLRFL

NLRKTGLNELPEEIGFLQNLQALNLEGSNMHRLPPHITRLGNLVHLFTDIRIQLPEGIAKMRSLETLKWVDLSNH

SSNIVKELGQLENLRELKLFMPNDDICDEHVKVIASCLVELGRHNLRRLYIVGYTELPNSLLPDPWCPSPLKLEE

LDISDSPMVQVPSWMRSFVQLKRLGLILKDVSDEDLTTLGRLPSLLHLHLNIPRGEPGYEDRLLISGCHGFSCLR

QFYLTGQQPIFTAGSMPRLELLRVEMDESKPEFLTNASLENLPCLTTVKCLLFNFQRGEVAQNGKTAMARAMSSH

PNHPSLVYE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	150	461	1.7e-59
NB-ARC [Pfam ls]	150	461	1.1e-59
LRR [Pfam ls]	596	618	4.2
LRR [Pfam ls]	619	641	3.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	571	595	1.3
LRR [sensitive, ls]	571	595	34
LRR [sensitive, ls]	596	618	0.16
LRR [sensitive, ls]	596	618	4.2
LRR [sensitive, ls]	619	641	0.13
LRR [sensitive, ls]	619	641	3.5
LRR [sensitive, ls]	747	769	0.48
LRR [sensitive, ls]	747	769	13

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	3	871	3e-54
Mla1 [Hordeum vulgare].	10	906	1e-133
RPM1 [A. thaliana]	17	798	7e-59
Pib [Oryza sativa].	48	317	3e-15
Pi-ta [Oryza sativa]	61	689	2e-79
Pib [Oryza sativa].	141	646	1e-61
N [N. glutinosa]	162	506	6e-11
RPS2 [A. thaliana]	188	692	2e-25
Xa1 [Oryza sativa]	195	692	3e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3494.m00119

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)