Report for 3499.m00160

 > 3499.m00160, length: 559, copies: 1 

MAAAVLNALAPAATVAQLAGADAAGLVSAILQAVRAARRNRRECRLLARRAMMVGDLLRLLPPESETMRRPEVRR

ALDGLGGALRQALELVESCQESGAVRGLMTAGRQAEQFREVQGEINDYMLLFPVVSHIDITRRLDLIYGLLLPAD

SQPHQMPEDAPGSPGDHFEADVRNVEITAAEVIPFESNQTITEPFEFGEHHVAGHQEGLEELLSKVQRLKWLCWW

SQHDSLERPSTYDLLKAATNNFSSKSKIASGGWATVYKDIQTLTICKSFAAQIDNQSHLEKISFDFTFQAQMRNS

LEIAIKVYPMGTGEKRVFSQYERELNLLTKLQHTNIIKLLGHCTGEWELILIYEYMPNGSLDKFIHGPNREVSFD

WFSCFKIIQGIAEGLLYLHTGYIAPEYLRGGILSTKVDVYAYGVILLEIITGRRSCIPCLKDDEYVHLTEYAWDL

WRTGRSAELLDAALRNEARIAEITSCIQIALLCVQKDPADRPSMLDVLAMLRDEKIVAAPKKPGDLLLGDETSVE

SGDLLLGEETSGETAHWFASSGATCSSTEFTVPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	247	503	3.5e-11
Ser/Thr pkinase [Pfam fs]	304	394	3.4e-14
Ser/Thr pkinase [Pfam fs]	396	501	1.4e-06

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	233	507	2e-17
Rpg1 [Hordeum vulgare]	236	525	3e-15
Pto [L. esculentum]	240	498	1e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3499.m00160

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)