Report for 3501.m00163

 > 3501.m00163, length: 684, copies: 2 

MEGIKLKFQGYRRDRLNFRDMKEIEYLVLLDDIWNARDWDILRCSLPNNHLGSRIITTTRIVDVARSCCSHKEDH

IYKMGPLSDLDSQRLFFRRIFGSDDGCPTQLKRISMDILKRCRGLPLATLTLASILADVPMLAEKWKQVHNSIGL

ATPGENMNRILSLSFHDLPNHLKTCLLYLSIFPEDYVIEREQLVWRWIAEGFIPETRGIPLEGVGSAYFNELINR

SMIQPADVQYDGTVQSCRVHDMILELIVSISTKINFVAVLHKDQDETRFTDYKTKVRRLAHQSNCIEKLLERMSR

DDLSHIRSIISFDYVKGIPHLGDFQALRVLDLGSCRSIENHHIENLEMLYQLKYLDLSRTSISELPMQIDNLRYL

ETLDLRGCAIEKLPASTVRLQNMQRLLVNRSVKFPDEIGHMQALQTLLFVSMSCNSIKFVEELSKLIKMRVLNIT

FSKPVDMVDEVRKYTDSLVSSLNELFNLESLKIDPEEGCSLDSLMGVYLTFGCLKKLVIGYISRIPKWINPSMYN

LVHLELKVDIVREEDLHSLELLPCLLYLQLEMTDGSSKMLTVGSEGFRCLRESQFIWKNDGMGLVFLEGAMPELQ

TLHLYFRTHETIANYSGVDGNGIENLSRLKKLCVDVDCSGSTREEVEAAEDSIRKAADRHRTKLTLEIRRWCEAC

MIEEEAHDG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	208	2.8e-10
NB-ARC [Pfam fs]	26	208	1.9e-39
LRR [Pfam ls]	351	373	0.22
LRR [Pfam ls]	374	397	3.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	326	350	2.2
LRR [sensitive, ls]	326	350	59
LRR [sensitive, ls]	351	373	0.0085
LRR [sensitive, ls]	351	373	0.22
LRR [sensitive, ls]	374	397	0.12
LRR [sensitive, ls]	374	397	3.1
LRR [sensitive, ls]	421	442	2
LRR [sensitive, ls]	421	442	53

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPS2 [A. thaliana]	7	381	3e-20
I2 [L. esculentum]	21	560	1e-39
Pi-ta [Oryza sativa]	21	668	6e-62
Xa1 [Oryza sativa]	21	483	2e-23
RPM1 [A. thaliana]	26	660	6e-52
Mla1 [Hordeum vulgare].	26	660	4e-84
Pib [Oryza sativa].	27	429	1e-50

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3501.m00163

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)