Report for 3506.m00185

 > 3506.m00185, length: 802, copies: 1 

MWDKKSWGLIRCALQDSNHRSRVVVTTRVFEVATYVGDVYKTQPLSRNDSEKLLYTRIVQGEGKCLDSSLVEVCD

KFLKKCGGVPLAIITIASLLANKPQEDWSEVYSTIVLGHGGNDDVENTRRILSLSYYDLPLHLKPCLLYLSIFPE

DYYIEKNLLIWKWIAEGFVHEKQAPGVGLFELGEGYFNELINRSMIQPVEAEDKGYVDGCRVHDMVLDMICLLSF

EENFVTVLDGSEKQESPRIKTRRLALQHRNFEENRHQLGNVGVDQLRSFVVSECDGITVESPSFHVLRVLALENH

FSRNYYCKHILQHLGNLHHLRYLGLQNVRTSELPDEVGDLKFLQVLDLSGTGIQELPESVGLLTKLLSLRANEGT

RVSAGSIVKLTSLQEMWICPADISQFVKVLGKLRELRVLHTSLFTHGQDERTDRDLLESLQNLHKIHTIDIGGSS

RMKSVMWEAGFTSPRRLRHLRLRSLVFYRMPVGINPLLLPNLCYLDLQVQIVKEQDMETLGRLPELRHLKLCSCK

THVVSVEKAAGDGYFRKLRYFSTPCSFLRFDLHGVICSTKTIMPRLESLEFFVRVLFLRDANLLGFDKLLGFGNH

GRTSLRRVEATMACSGARVTEVEEAEAALAQVAAVHPNRPTLKTTRLGDSKIHSPYKEPTSVNPKVVFQNVNVRE

MKDDDGYFDFHWLLRNPWVKKFGVSIFCEDLRFRSFAYLKLVSHSQPEVVHRDVNVRKIKDKGRNIKFSWLLRNQ

YVEKFRISINCENASLREVKEAEETAREVTWIHPNSPRVEIVRYGEDKMVSD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	174	8.1e-06
NB-ARC [Pfam fs]	2	174	1e-32
LRR [Pfam ls]	342	364	0.043

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	270	293	2.5
LRR [sensitive, ls]	270	293	67
LRR [sensitive, ls]	342	364	0.0016
LRR [sensitive, ls]	342	364	0.043

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	439	3e-23
RPM1 [A. thaliana]	1	516	9e-37
Mla1 [Hordeum vulgare].	1	642	6e-85
Pi-ta [Oryza sativa]	1	438	7e-42
Pib [Oryza sativa].	3	375	1e-42
Xa1 [Oryza sativa]	15	442	8e-17
RPS2 [A. thaliana]	16	366	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3506.m00185

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)