Report for 3511.m00147

 > 3511.m00147, length: 935, copies: 1 

MASGMVVSASMGVMKPLLTKLTVLMGDEYKKLKGVRKQVSFLKDELTTMSAFLEKLAFMDDDGGELDPLVKDWRN

HVREMTYDIEDCIDDFMHQLGGGADASGFLQKTARRLKTLRVRHQIANQIDEIKARVIEANQRRRRYELDGCSNS

RASESVAIDPRLTALYQKADNLVGIDGPTEELIQLLTDAGQQKLMVVSIVGFGGLGKTTLAKQVYDKIGQQFDCK

AFVSVSQRPDIARLLRTIQSKFNIQESSQAREVQDIIDDIRYYLGNKRYLIVVDDLWKQEAWNIIHCAFPENSNG

SRVIVTTRVEDVACWACSNHRYIYKMKALDSDDSKKLFFNRVFGFEDGCPSQYEKVSAEILKKCGGLPLAIITIA

SLLACRPARIMQEWERIRNSLGTPFGTNPSLEGMRQILNLSYKNLPLHLRTCLLYLGNYPEDYKIGRNDVVRQWI

AEGFVRSSPGQDLEDVGQSYFNELVNRGLIQPEQNYDREVTGCRVHDMMLDLILSKCKEDNFISVAYSGEDYLSI

ARQHGYSSNKVRRLSLQFKAAESDCTVLIEGKATPAHLAQVRSISLFEKSTSGLPLLLRFKYLRVLHIMLGHGCE

RADLTAVSKLLQLRCLIFLDYGCKVELPSRICDLVHLETLDIACNVITSIPLDIVSLPCLSDLRLPGGVQLNCLP

NSKSLRTLVICPPLDMDFFKALGEQTNLRDLRLYFDGKESSTASNLDSLGSSVGKLQNLRNLKIYFQFGISGDSL

MGSLSRFPRSIEILDMQTCCLSRVPRWINVALVNLRRLHLYVSEASTDEVSILGELPSLVFLDLNLRLKSKGTIM

FGGGEGSFPALEDLLLRCVGDVASHSRLCFLAGVMPKLQRLVLRFWICELGIDTAPVGMEHLSSLQLIFVDIYVL

QEKINVFPRDAVEHVFRQAAQAHPNQPAFEFHCSG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	157	460	2.3e-72
NB-ARC [Pfam ls]	157	460	6.3e-73
LRR [Pfam ls]	636	658	0.065

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	636	658	0.0025
LRR [sensitive, ls]	636	658	0.065
LRR [sensitive, ls]	733	758	3.9
LRR [sensitive, ls]	733	758	100
LRR [sensitive, ls]	760	781	2.7
LRR [sensitive, ls]	760	781	72

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	7	726	2e-97
Mla1 [Hordeum vulgare].	12	927	1e-121
RPM1 [A. thaliana]	20	917	5e-61
M [L. usitatissimum]	65	443	2e-16
I2 [L. esculentum]	67	703	4e-41
Pib [Oryza sativa].	69	341	6e-18
RPS2 [A. thaliana]	119	471	2e-23
Xa1 [Oryza sativa]	120	841	3e-33
L6 [L. usitatissimum]	165	396	4e-14
N [N. glutinosa]	171	420	5e-14
Pib [Oryza sativa].	172	657	1e-54

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3511.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)