Report for 3511.m00148

 > 3511.m00148, length: 936, copies: 1 

MARSAGIVVSASMGVMKPLLAKLTTLMGDEYKKLKGVRKQVSFLKDELTTMSAFLEKLAFMDDDGGELDPLVKDW

RNHVREMTYDIEDCIDDFMHQLGGGADASGFLQKTARRLKTLRVRHQIANQIDEIKARVIEVNQRRKRYELDGCS

NSRASDPVVVDPRLTSLYQKADNLVGIDGPTEELIQLLTDAGQQKLMVVSIVGFGGLGKTTLAKQVYDKIGQQFD

CKAFVSVSQRPDIARLLSTIQSKLNIQESSQAHEVQDIIDGIRYYLGNKRYLIVVDDLWKREAWDIISCAFPENA

NGSRVIVTTRVEDVACWACSNHQYIHRMKPLNSEDSKRLFFKRVIRSKDGCPSQYEEVSAEILKKCGGLPLAIIT

IASLLACEQARIMQEWESIRNSLGTPFGTNPSLEGMRQILNLSYKNLPLHLRTCLLYLAKYPEDSSIDRDDVVRQ

WIAEGFVRSSPGQDLEDVGKSYFNELINRGLIQPEQNNYGVVMGCRVHDMMLDLILSRCKEDNFISVAYSCEEYM

LIAGQHGYNYNKVHRLSVQSMDSESDCTILMEGGVIPARLAHVRSVSLFGKHPRELPLLLPLFKYLRVLHITFYL

LDQADLTAIRHLVQLRYLLFVSHCFKVELPSRICGLVHLETLEIVAYHAVSFPSDIVSLACLSHLRLPRGGLPNG

IPKIKSLRTLEMFHPPDMDIKALAELTNLRKLSLFFDLEATMGTASNLNALGSSIGKLQNLRYLEFTVPTVKFDD

DGLLGSLSAFPCSIEILKLETWRFSRIPTWINADLCHLHLLELLVSETCTDEVGVVGELPSLIHLHLQVELKMKG

TVVFGASGGSFPALESLILTCGGDVASQLGFQAGVMPKLQMLDVRFERCDSGIDTPPVGMEHLLSLQHIRVEINV

ELEDRKIYPRDTAEHVLREAAQAHPNKPAFNFYFFS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	158	462	1.7e-71
NB-ARC [Pfam ls]	158	462	4.7e-72

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	6	818	2e-47
Pi-ta [Oryza sativa]	9	748	4e-96
Mla1 [Hordeum vulgare].	14	928	1e-120
RPM1 [A. thaliana]	20	905	5e-65
M [L. usitatissimum]	67	434	2e-17
Pib [Oryza sativa].	71	343	3e-18
RPS2 [A. thaliana]	121	739	8e-25
Xa1 [Oryza sativa]	122	740	4e-31
L6 [L. usitatissimum]	166	811	3e-16
N [N. glutinosa]	173	422	4e-13
Pib [Oryza sativa].	174	898	4e-52

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3511.m00148

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)