Report for 3598.m00120

 > 3598.m00120, length: 1343, copies: 1 

MAELTAGAVSSLLGLIRNAELMMSGRAKEDMQFIKDEMDSINGTLMYLTENKASHNDQVRVWMRQVRDIAYVADD

CITLYRRDLTPPEPGFWPWLRHVPTWLSTVPTRHRLAKKIHELKDRVRDVGERRQRYGVVGEIPTKNAASSSGHG

SQTAPSSDAAAATAAADARADEEDDDQNHAATATVVDGRPDRRRALEPRTLEDYCCENLHKWLKEFNTKRGSMVP

FIAVEAPRPEDAAAVSSIVSYVAAEAAGFNPAVWVNLPLLHAEFDLPLEPWEILCYILGELKPRSQPVQAQGSRD

KRKQKQEEGGKDDKAMGSDDDDDNLQSQASDEKWQVFDEMWEEIEKRNFDDRIEQLKTKIDSIKDKKTTNEIEKT

VRSQEKVNLNALVYNKPLGILFLALLPPMPNDVKSVRRALRTLASGEANIIRKIAEALKIHMEVSEVNKIHLSKK

QYVNILREVFPTVSSTPLKQDKSTTKSTALGPSAAATMLGKDQIKEIVHKAILDKQLEKHLEVADAIEETKNKIG

DIKEKIKVQLVIQGIVDKIKDHLEKDKRTLIILQDDKGFLSSCEETTMNALSLLGYTCADAMVVVITKESQVANK

FCYPPREPITYSIAGLYHDTVLQLTSQQAKQNNNYNSQLFRDILDKCDPDEFCMKMFAHALYAEPNRSNNDLREL

YKTLVPQKSLASNASKASPEPDKSNDSTQLVSEESSLCNNAKKIFEFSYNDMPTEYLSCLLYLAIFPQGQSIRRS

TLQARWVVEGLITGKDDWPSADCAVRNAERCFDVLIDRWLVYPGDVTAAGKVKSCMVDNLVHEFITKAAKEKQFV

KESQLHHLAHHFSIFCNLRLRRSDNIEKFMQNLKYFSPYLQLLKVLDLEGCQSFDKNNHYLEDICNKVLLLKYLS

LKDTNVAHLPNAINNLHELEVLDIRQAKVPEIDTNSIMLFNLKRLLAGQVYPSPRYNSTGMYLKRHEETISSSVR

IPRKIEKMVKMEVMYSVNVSRDGNMLTEIGKLRQLRKLGVVIDDHDGHLRKLLQVISDLSGSLRSLSITLIGTGS

EQAPSSEETSADCLKQHPKLLESLSISGVIDKVQLLPLLAIGQGNRNLAKVTISGTMLKQEDLKKDIAKLHNLCC

FRLRHRSYDDEKITFEENEFLELKYLIIEGTNMMSIIFKQGAAPKIEKIILSFTSTTHIAGIVDLPNLKELELKG

NNNDRKLVACLAGAPHLSRLTLDGTLLDLNELKILAELPSLRSLILLQQSCVRSSLNFNNGEFSKLNLLVVNCSN

ITSISFTDEGAAPKLEKITWSFTTKMLSLSGICYLPQLKELELNGKIIPDQVIQDIKEHKNKPIFNHQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	722	767	1.1e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	540	1019	8e-15
Pib [Oryza sativa].	551	1216	1e-24
RPM1 [A. thaliana]	717	1198	6e-12
Pi-ta [Oryza sativa]	717	923	3e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	342	367
putative coiled-coil	512	532

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3598.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)