Report for 3638.m00168

 > 3638.m00168, length: 630, copies: 2 

MPPGARARRIAALDLIFLVFLRLASAYQRPSDAHINCIDSFCLGGYTCSETTATTSCTAYLTFRSDPPLSVAYLL

NATPSAVAAANSVPLAVSPVDGTQLLLVPVPCSCNRATGYYQHNTTYAIQELDTFFLIANNTFQGLTTYQSIIAN

NPASEAMSPVINGPLAVPLRCACPSATTGRINNLLTYVVQEGDNVTSIARRFNSTHGDVLAANTLLVPLVHPPHS

RVVLANTTITSTTPPESQKFYVSSPCSNGLLAGLGIGVGCGVSAWAAVLAVFLLWRRRRRRPVGDSSGMARETPL

VAAVRGAVETLAAYSYADIETATAGFAEERRVAAGSSVYRAVINGEAFAVKRVAAGGDDVRGEVDVLGRVNHSGL

VRLRGLCANGDDTYLVLEFAENGALSEWLHPGSAAACLRRVLGWKQRVLVALDVAGGLNYLHHFTNPPYVHKNLN

SGNVLLDANLRAKVSSLGFARAVAVAVAAGDDSIALMTHHVVGTHGYLAPEYLEHGLISPKLDVFSFGVIQLELL

SGKTAAFVTDDDGQNMLLWQAADGLVDGDGAWFKLRAFMDPQLQGHYPIGVASAVAALAVRCVAREPRARPSMEE

VFVTLSAVYNLTVDWDPQNYSASASMVLGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	326	603	1.4e-28
Ser/Thr pkinase [Pfam ls]	326	603	1.3e-28

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	263	605	2e-23
Rpg1 [Hordeum vulgare]	314	608	3e-19
Pto [L. esculentum]	318	611	1e-23
Rpg1 [Hordeum vulgare]	319	528	4e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	258	280	out -> in
putative TM domain	258	280	out -> in

Report for 3638.m00168

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)