Report for 3688.m00101

 > 3688.m00101, length: 473, copies: 1 

MEMPRKTGDKERTRRQRGGALRQEKLSSRSPPSLVPLRSPPSAGRSRGGGAGASIVGWDRWDPRTNGPQYPLYLV

YGYPPSTALPSCGDPAAASPPAGSGRGEGATACRHLPVGSTPPLQHSPTSITREIEWIEREGLPMDNGRPRYFIG

NKGLVTRMFSRISSRPMSLHLIGQPVTFVDEDRQSYAYIKIRKRTDLPQGLLISPSSPPSFPRITADLSLRTVEE

HMEGFLVTAATGALKSVLVKLAAMAGEFEGVRGQISFLADEFAAMHAFLLRMSDSEEGNADPQDKAWTREVRELS

YDIEDSLDEFMLHVVDGSANPDGFIVKCRNLLTKTMARRRIAKMIAEFKAQIKEVGERNARYMNGGISLMRTANA

TVDQRALTIFQDVSSLVGVDQPKKELIDLLMKDDGHVASEHLRTISIVGIGGLGKTTIANLIFEELREQFDCSAF

VSVSRNPVWILWVPHTHTAWLSD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	376	455	1.2e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	236	457	2e-28
Pi-ta [Oryza sativa]	256	457	2e-11
Pib [Oryza sativa].	270	453	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3688.m00101

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)