Report for 3707.m00170

 > 3707.m00170, length: 700, copies: 2 

MGTLESHNLACLSDDDSWELFSKKAFNKGVQQQVELVTAGKLIVKKCKGLPLALKTMGDMMSSKQQVKEWETIAR

SNTGDNDRGEDDILPVLKLSYRHLPPEMKQCFAFCSVFPKDHEMDKEVLIQLWMANGFIQEDETMGLEQKGEYVF

RNLVWRSFLQDVKQESQVINPKHLRYLDLSGSDMDVLPSSICTMYNLQTLRLNRCKKLRYLLEANSQNLEMLNIA

IITLLPKKEASTLLKDYRPISLIHGFAKLATKKAMSAGLLDKVNQWSRAPNNSLYADDAVIFFKPGCNEEEVLES

LKPHAKLKILELHGYSGLKIPQWMEDPQMLQCLTTLHFSNCSGCKDLSTVWFLVSIECMSLSKMENLTTLFMNVV

GVKAEGYYIPLQIFPRLKDMTLSQLSNLEKWTESTAGEANTSLVTFPKLATLCISDCPKLASVPDCSVLKELKTY

GYCSLAMSLLAHLTTLSELIYRENESMRMSLGSWPSLTKLHISSSYNQMATLEVDTNQGPLENLRILRLYGLNFF

TAASGLSKMHLGLWKCFAFVEDLCIGACNDLVHWPMEELMSLIHLRSLSIEHCDNLEGKGSSSEEIMPLYYLEKF

HIKDCKSLLDIPTMPASLEELCLLLCPRLVALPSNLGNLARLKTMSFEHCHDLKELPDGMDGLISLEELKIMGVP

RDREISTGSPPSDSDPSIPNGSRLP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	139	2.4e-05
NB-ARC [Pfam fs]	7	139	1.8e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	173	195	0.5
LRR [sensitive, ls]	173	195	10
LRR [sensitive, ls]	196	220	0.84
LRR [sensitive, ls]	196	220	18
LRR [sensitive, ls]	332	356	5.2
LRR [sensitive, ls]	332	356	110
LRR [sensitive, ls]	423	445	0.62
LRR [sensitive, ls]	423	445	13
LRR [sensitive, ls]	513	535	0.86
LRR [sensitive, ls]	513	535	18
LRR [sensitive, ls]	569	598	1.3
LRR [sensitive, ls]	569	598	27
LRR [sensitive, ls]	641	664	3.4
LRR [sensitive, ls]	641	664	70

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPS2 [A. thaliana]	1	168	3e-17
Xa1 [Oryza sativa]	1	633	5e-26
I2 [L. esculentum]	5	675	7e-30
RPM1 [A. thaliana]	7	160	2e-21
Pib [Oryza sativa].	7	133	2e-13
Mla1 [Hordeum vulgare].	12	162	7e-14
Pi-ta [Oryza sativa]	12	170	3e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3707.m00170

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)