Report for 3727.m00117


> 3727.m00117, length: 763, copies: 2
MEILSPSPPPSPGPASASASASGSAMDSFIHRGAGWHFPRRDNVDARVHVAVGRSPEKTLGLLRWAFRRFACAQV
VLVHVHQPSPLIPTLLGKIPAAQATEELVLSHRKSEKDEMNKILLTYLTFCHRAQVQASLLVTENEQIHDGIITL
VKDHGITKLVMGSTPDTCFKLKASYGKASFMARNAPSFCEIWFVWRGRHIWTREAAAAIGNNISVYNEDDVMIRK
RIRFSSTSNNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDANHFCNIIVPNLQNAQSAFNSTFQPG
SSVDMESLVLYPQEILDKNFKQVILEAERSRKDAFVELLKRKDTESRVAGVIARAKASEFAQKQEMKMREELEAL
LTATKKQHEDLAENKEKATEGLDSSMRKLAILDARAKSIAFRMNEAVAELKLIQSSIGTLNQEIPKREKLELVHT
DQVESSTVCADDLYNFRELTLSDIKAATCKFSDSLKVLPRGLGCVYKGEIMNRSVMIYKLHSCIIQSSMQFQQEV
HLISKVRHPHLVTLIGACPDALCLVYEYVPNGSLHDRLWSKCGIPQLPWKIRARIVAEISSALFFLHSCKPQMIV
HGDLKLENILLDANLHCKIADCGISQLFMEDAKDADPEYRRSKPLTPKSDIYSFGIVILQLLTGKQAAGLPSEVR
RAMSSGKLWSLLDPTAGEWPLEVARRLAELGLKCSEAASPELLTPETVRDLEQLHLMRDNRQVPSFFLCPILKAR
TKPKNIDRAEAHK


HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
Ser/Thr pkinase [Pfam ls]4827299.4e-19
Ser/Thr pkinase [Pfam fs]4936217.3e-24
Ser/Thr pkinase [Pfam fs]6416640.0029

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
Rpg1 [Hordeum vulgare]4347111e-21
FLS2 [A.thaliana]4417412e-16
Pto [L. esculentum]4607162e-26
Rpg1 [Hordeum vulgare]4687127e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd
putative coiled-coil369392

TM-HMM search for transmembrane domains

DomainBeginEndOrientation