Report for 3730.m00138

 > 3730.m00138, length: 647, copies: 2 

MPAPAPAAPWPVSQEISSLADRLLAHAGGDGDGAAGMRDLAGALLRIQPVARGVERRGDAGQRDLADWLLQLKGA

VAEADDLLDELLLRRRHGSRLSPSLASCLARGKPPSRELKRLVGRIDRIHDVSERLVDAAAEEEAGEAGRGVRSP

NRVTGSVLTERKVFGREKECGEVISRLVDCPENACSSALPVVAIVGHGGMGKTTVAQFVYNDERIEQKFDIKAWV

CVWDRSDAAELTREILQSIGGPDDTLYGDNSAKLDILQAKLEVLVRSKRFLLVLDDVWNDEAKMELENKDLWRKV

LAPLRSAGRGSKILVTTRMKLVARYLNSTHVVSLDVLGSSDCWLLLKEAALGGESKDIPPDLQEIGRTIAAKAKG

SPLVSKALGQMLRNTRSTWRWRALLDAEISHNIIISSLQHSYQHLPGHLQRCFAYCSIFPRGCRFQRDKLVKMWV

ALGFIQTSRKERKGEYDLAQEYFYDLLSRSFFCAASKDNQTFYFLDNLMHDLAQHASVHDCMKIDEGMPSVIPPT

VRHLSVSTDYFPQLKSKCKLERLRTLLVLRSSSLSLSHLPSKFLSEFKNLRVLDLSESDILELPETISQLFHLHY

LALCHMTSKLPKCIYKLVQSGVLDMPILLFPDSHPRGMSKFVTQKTS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	146	460	8.7e-67
NB-ARC [Pfam ls]	146	460	2.7e-67

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	10	617	2e-22
I2 [L. esculentum]	37	625	4e-77
Pib [Oryza sativa].	129	625	2e-35
RPM1 [A. thaliana]	151	624	1e-37
Xa1 [Oryza sativa]	151	625	1e-61
Mla1 [Hordeum vulgare].	182	625	3e-30
RPS2 [A. thaliana]	191	636	1e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3730.m00138

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)