Report for 3740.m00118

 > 3740.m00118, length: 940, copies: 1 

MAARSWLLLLCFVAVATAGVLQARAQPDSNGFISVDCGLPGKTGFVDDKTKISYAADDGFTDGGACHNISAEYIT

PGLAKRYHTLRSFPDGKRNCYTLRSLVAGLKYLFRTTFFYGNYDGLNKLPVFDLYVGVNYWTMVNITGPGDAVIV

EAIVVVPDDFVQVCLVNTGAGTPFISGLDLRPLKNTLYPQSNATQGLVLLGRLNFGPTDYTDVIRYPDDPHDRIW

FPWVDSTKWSQISSTKKVQDLDNDMYETPTAVMQTAITPRNASRNIEFSWDPVPLPNDPTPGYIAIFHFSELQLL

PGNAVREFYINLNGKPWSLTAFKPEYLYNDATFNRNPFLRYPQYNISINATANSTLPPLINAVEVFSVIPTATIG

TDPEDVAAITAIKEKYQVVKNWMGDPCVPKMLAWDKLTCSYAISNPARIIGLNLSSSGLSGEVSSYFGNLKAIQN

LDLSNNKLTGPIPDALSQLPSLTFLDLTGNQLSGSIPSGLLKRIQDGSLNLRYGNNPNLCTNGDSCQPAKKKSKL

AIYIVIPIVIVLVVVIISVAVLLCCLLRRKKQAAMSNSVKPQNETVSNVSSNGGYGHSSSLQLKNRRFTYNELEK

ITNNFQRVLGRGGFGYVYDGFLEDGTQVAVKLRSESSNQGAKEFLAEAQILTRIHHKNLVSMIGYCKDGEYMALV

YEYMSEGTLQEHIAGKNNNRIYLTWRERLRIALESAQGLEYLHKACNPPLIHRDVKATNILLNTRLEAKIADFGL

SKTFNHVNDTHVSTNTLVGTPGYVDPEYQATMQPTTKSDVYSFGVVLLELITGKPSILREPGPISIIQWARQRLA

RGNIEGVVDAHMHGDHDVNGVWKAADIALKCTAQTSTQRPTMTDVVAQLQECLELEDRRCGMEDTYNNFYAGNNN

DPNSSYNMYNTDQSTDVSQNNTMEHNFERVPTMATGPVAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam fs]	447	470	3.7e-05
LRR [Pfam ls]	447	470	0.00062
LRR [Pfam ls]	471	495	0.006
Ser/Thr pkinase [Pfam fs]	603	807	8.5e-53
Ser/Thr pkinase [Pfam ls]	603	876	2.5e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	423	446	0.48
LRR [sensitive, ls]	423	446	13
LRR [sensitive, ls]	447	470	2.3e-05
LRR [sensitive, ls]	447	470	0.00062
LRR [sensitive, ls]	471	495	0.00022
LRR [sensitive, ls]	471	495	0.006

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	374	704	1e-25
FLS2 [A.thaliana]	424	876	3e-55
Pto [L. esculentum]	584	882	6e-54
Rpg1 [Hordeum vulgare]	589	874	2e-36
Rpg1 [Hordeum vulgare]	593	882	1e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	530	552	out -> in

Report for 3740.m00118

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)