Report for 3740.m00119

 > 3740.m00119, length: 965, copies: 1 

MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSYIDDKTKISYASDDGFTDGGKHYNVSPEYIKP

AVTARYYNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNR

EAIVVVPDDSVQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRYPDDPHDRVWF

PWFDAAKWNEISTTNRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNSQPQPNDPAPGYIAIFHFSELENLP

NNATRQFYININGILFDDGFTPSFLYAEASYSSKPFVRHPQYNITINATANSTMPPLINAVEVYSVISTANIGTD

SQDVSAIMTIKAKYQVKKNWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKALQYLD

LSNNNLTGSIPNALSQLSSLTIFTGGEDDDGWLMVDNNDGAAGGRQRQRWRTVEGAARAVEGRRRREHRDLTGNQ

LNGTIPPGLLKRIQDGFLNLRYGNNPNLCTNGNSCQPPKNKSKLAIYIVVPIVLVLAIVSVTTLLYCLLRRKKQG

SMNNSVKRQNETMRYGPTNNGSGHNSSLRLENRWFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVR

TESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYLTWKERLRIAL

ESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNPENGTHVSTNKLVGTPGYVDPEEILIVR

LIGTDQMRRYQSTMQPTTKSDVYSFGVVLLELVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVNASMHGDYDV

NGLWKVADIALKCTALSSAHRPTMTDVVAQLQECLELEDKHQVSDINNGFYNGNSGDLNSNFYTT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	421	444	6.6
LRR [Pfam fs]	445	468	1.6e-05
LRR [Pfam ls]	445	468	0.00025
Ser/Thr pkinase [Pfam fs]	645	864	3.8e-52
Ser/Thr pkinase [Pfam ls]	645	933	3.5e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	421	444	0.24
LRR [sensitive, ls]	421	444	6.6
LRR [sensitive, ls]	445	468	9.3e-06
LRR [sensitive, ls]	445	468	0.00025

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	411	746	7e-17
FLS2 [A.thaliana]	422	933	2e-45
Pto [L. esculentum]	614	939	3e-53
Rpg1 [Hordeum vulgare]	631	931	7e-31
Rpg1 [Hordeum vulgare]	635	945	2e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	572	594	out -> in

Report for 3740.m00119

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)