Report for 3740.m00121

 > 3740.m00121, length: 701, copies: 1 

MSRYPDDPRDRVWTPWDSPSNWTEISTTRPVQQTYDDLFEVPTAVMQTAIVPMFATDNIELAWVAYTQPKDPSPG

YIAIMHFSELELSPPSRDVREFYINLNGNMMYSKGYKPVYLYAHAIYNTNPFLRYPQYNISINATYNSTMRPFIN

AMEVYSVFSTTTIGTYGQDASAMMVIKEKYQVKKNWMGDPCIPTEFTWESLTCSYENSKHVIKINLSSSGLSGEI

SSSFGDLKALQYLDLSNNNLTGSIPDALSQLPSLTVLYGNNPNLCTNDNSCQAAKHKSKLAIYIVAPVVLVLVIV

SVTILLFCLLGQKKKQGSMNTSIKPQNEANYVPTNDSDGHGSSMQLENRRFTYKDLEKITNNFQRVLGRGGFGKV

YDGFLEEGTQVAVKLRSESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKNGKYMALVYEYMSEGTLQEHIAGKR

NNGRHLTWRERLRIALESAQGLEYLHKWCNPPLIHRDVKATNILLNARLEAKIADFGLSKSFNLENGTHVSTNTL

VGTPGYVDPEYQATMQPSTKSDVYSFGVVLLELVTGKSAVLRDPEPISIIHWAQQRLAQGNIEEVVDACMCGDHD

VIGVWKVADIAFKCTAQVSARRPTMTDVVAQLQECLELEEEHCAVNDANNNFYTSNNSKPNSSYDTYAADHSIDV

SQNSVAFEMEKNFGRMPSTAPGPATR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam fs]	234	257	6.6e-06
LRR [Pfam ls]	234	257	9.9e-05
Ser/Thr pkinase [Pfam fs]	361	561	9.5e-52
Ser/Thr pkinase [Pfam ls]	361	634	3.9e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	210	233	0.29
LRR [sensitive, ls]	210	233	7.7
LRR [sensitive, ls]	234	257	3.6e-06
LRR [sensitive, ls]	234	257	9.9e-05

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	200	462	2e-16
FLS2 [A.thaliana]	204	634	9e-48
Rpg1 [Hordeum vulgare]	302	632	5e-35
Pto [L. esculentum]	342	640	7e-55
Rpg1 [Hordeum vulgare]	351	634	5e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	285	307	in -> out

Report for 3740.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)