Report for 3740.m00122

 > 3740.m00122, length: 942, copies: 1 

MAAWSWLILLCLVAAATAGVLQARAQPDSKGFISVDCGLPGKTSYVDDKTKISYAADDGFTDGGSFHNISAEYIT

PALSARYHNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLSKLPIFDVYIGVNFWMMVNISDPSGATLL

EAIVVVPDDFVQVCLVNTGTGTPFISGLDLRPLEKKLYPQANDKRGLSLFGRWNFGPISTTEFIRYPDDPHDRIW

MPWVSPSYWVEVSTTRPVQHTDEDVFDAPTKVMQTAIAPLNASSNIEFAWVPYTQPKDPAPGYITVMHFSELQLR

SSNATRQFYINLNGNMVFSQGYTPAYLYADAIFNSNPFLRYPQYNISINATANSTLPPIINAIEVFSVFSTATVG

TDGQDASAMMVIKEKYQVKKNWMGDPCVPKTLAWDKLTCSYDSSKPARITDINLSSGGLSGEISSAFANLKALQN

LDLSNNNLTGSIPDALSQLPSLAVLDLTGNQLNGSIPSGLLKRIQDGTLNIKYGNNPNLCTNDNSCQPAKHKSKL

AIYVAVPVVLVLVIVSVTILLFCLLGRKKKQGSMNTSVKPQNETASYVPTNGSHGHGSSMQLENRRFTYNDLEKI

TNNFQRVLGEGGFGKVYDGFLEDGTQVAVKLRSESSNQGDKEFLAEAQILTRIHHKSLVSMIGYCKDGKYMALVY

EYMSEGTLREHISGKRNNGRYLTWRERLRIALESAQGLEYLHKWCNPPLIHRDVKATNILLNAKLEAKIADFGLS

KTFNLENGTHVSTNTLVGTPGYVDPEYQATMQPTTKSDVYSFGVVLLELVTGKPAVLRDPEPISIIHWAQQRLAQ

GNIEGVVDARMHGDHDVNGVWKATDIALKCTTQVSAQRPTMTDVVAQLQECLELEEGRCAISNANNNFYTDNNSN

SNSSYDMYATDHSIDVSQNSAAFETERNFGRMPSTATGPAAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	423	446	5.6
LRR [Pfam fs]	447	470	2.4e-05
LRR [Pfam ls]	447	470	0.00038
LRR [Pfam ls]	471	495	0.067
Ser/Thr pkinase [Pfam fs]	602	804	8.4e-54
Ser/Thr pkinase [Pfam ls]	602	875	6.7e-54

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	423	446	0.21
LRR [sensitive, ls]	423	446	5.6
LRR [sensitive, ls]	447	470	1.4e-05
LRR [sensitive, ls]	447	470	0.00038
LRR [sensitive, ls]	471	495	0.0025
LRR [sensitive, ls]	471	495	0.067

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	420	703	3e-21
FLS2 [A.thaliana]	424	875	6e-54
Pto [L. esculentum]	583	881	6e-56
Rpg1 [Hordeum vulgare]	588	873	3e-35
Rpg1 [Hordeum vulgare]	592	875	3e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	528	550	out -> in

Report for 3740.m00122

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)