Report for 3746.m00187

 > 3746.m00187, length: 655, copies: 1 

MDSATPPPPPARTSAATTTRSPAEAGSGAGVPAPPVSGGLSSGTTAAVVVVVVVAFLGLAGMFACLSQRRRRRQA

ERYYPGFAVPSYTPQHMSGEAPFLRPPSASGSMNFSAGQSQGVSPMMSSGQAYGQSTSYGQQQRLTSANYSTGSQ

GGGAARSVAASGELSVGNTKAFTFDELYDITAGFARDKLLGEGGFGCVFQGTLADGKAVAVKQLKGGGGQGEREF

QAEVEIISRVHHRHLVSLVGYCIAEDHRLLVYDFVSNDTLHHHLHGHPRIIHRDIKSSNILLDEHFEAQVADFGL

ARLAENDVTHVSTRVMGTFGYLAPEYASTGKLTEKSDVFSFGVVLLELITGRKPVDSSRPLGDESLVEWDKETGG

LDPLLTLIDTSRQNQPTSRPLLNRAIENQEFDELVDPRLDGEYDDVEMFRVIEAAAACIRHSAARRPKMGQVVRV

LDSLTDVDLSNGVQPGKSQMFNVANTADIRQFQRMAFGSQDFSSEYSQSRRQKGFREVSLELVGNERQDRCRVNS

QRCVAHFGLAKLAKNDVTNVSTRVMGTFGYLAPKYAWKLAEKSDMFSFGVVLMELITGWKPVDSSRPLGNESLIE

WESSNTSAPSDCKYLLRDAQFYHVMLVFGDMFFLTILILTLKIYVFKQFIIQHIH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	184	272	1.2e-16
Ser/Thr pkinase [Pfam ls]	184	406	1.5e-28
Ser/Thr pkinase [Pfam fs]	274	354	1.1e-20
Ser/Thr pkinase [Pfam fs]	567	583	0.017

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	169	454	2e-27
FLS2 [A.thaliana]	170	454	3e-24
Pto [L. esculentum]	172	452	1e-42
Rpg1 [Hordeum vulgare]	172	399	7e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	45	67	out -> in
putative TM domain	45	67	out -> in
putative TM domain	624	646	in -> out
putative TM domain	624	646	in -> out

Report for 3746.m00187

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)