Report for 3751.m00155

 > 3751.m00155, length: 976, copies: 1 

MAATVPAAAGPDDLTACEAAAESSQLLGWPIDSAQDFEQEMEGNGIMVSAATGAMNSLLAKLAALLEEDYQMHKG

MKREIAFLKDELSSMNALLEGLADTEATLDPQTKEWRSQVREMSYDIEDCIDEYTRQLRHGRPQRPGGNGIMGFF

SGYVQKVKDLVGRHEIAEQIQELKARIVEAGQRRKRYKLDSAVNCKSNHVVPIDRRLPALYAELDALVGIDGPRD

EIIKSLDDGEQRMKVVSIVGSGGLGKSTLANQVYQKIGNQFDCKAFVSLSQHPVMGMIFETILYQVNDEVGTIRS

GDKEQVINELRAFLKNKRYFIVIDDIWSAQAWKTIRYSLLENNCGSRILVTTRIGTVAKSCSSPCLNLVYELRVL

SEDDSKRLFFRRIFGSEDKCPHQLKDIAVEIVRKCGGLPLAIISMASLLTTKSYVRAEWFKVRDSIGSGIEKNSD

VEEMNMILSLSYYDLPHHLRTCLLYLSMFPEDYVINRDYLVRRWVAEGFIKANGGRTFEEEGECYFNELINRSMI

QPVHTQYDGRVYSCKVHDMILDLIISKATEENFVTIVTDRKQMLVSKDKVHRLSFYNYGQEDVTLYSMVTTHVRS

LNIFRYSEQMPPLSNFPALRMLDLDGNNNLESSYLEDIGKLFQLRYLRIRASNISLPDQIGELQFLVILDLLNCI

GISKLPASIVILRHLKCLVVHRVELPDGVGNLQALEYMSLVVVDYSTSVSSLQELGTLTKLRTLGLDWRIGDFHK

EKLTYADNFVSSLGKLGRSNLQYLTLISPWSLDFLLDSWSPPPHLLQRLGITGWYLSRIPVWMASLADLTYLDIE

VKVRQETLQILGNFPALQFLELYSNAADYGDRWLTVSNCGFRCLQKFKFVHWMNLVFEEGAMPMLETLEFQIIAH

EARTECGFGPPDLGICHLSSIRNLIINIYCECARIEDVEALEAAIWLAASTLPNHPTLTLHRFREAEMVKNNQGN

L

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	202	505	2.1e-68
NB-ARC [Pfam ls]	202	505	5.9e-69

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	45	896	1e-44
RPM1 [A. thaliana]	51	893	1e-70
Mla1 [Hordeum vulgare].	52	958	1e-145
Pi-ta [Oryza sativa]	55	739	2e-92
Pib [Oryza sativa].	109	446	3e-16
N [N. glutinosa]	150	424	8e-11
Xa1 [Oryza sativa]	164	741	4e-32
RPS2 [A. thaliana]	171	776	5e-24
Pib [Oryza sativa].	212	691	4e-60
M [L. usitatissimum]	213	479	7e-14
RPP5 [A. thaliana]	215	437	3e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	77	97
putative coiled-coil	168	188

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3751.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)