Report for 3775.m00191

 > 3775.m00191, length: 730, copies: 1 

MAGVAAVRLLLLQAAAALALAAAAAAGGPEAATLLAFRGALRGPHGAPPEPLNQWATTTPGPCAGAGTGVSLWYG

VTCHQRTGEVPGLRLEYLGLQSPAPGMGPIAPAPGAPEPLSWANNKLNGGGTPRWCWVRGSKSRARPGQAPLPAL

RGFRALSIANNNLTGPFPEVSMLPALKMLYMSRNKLDGGIPPAAFAHMRGLRKLFLSDNAFTGPIPTSITSPKLL

VLQLSKNRFDGPLPDFNQKELRLVDVSDNNLSGPIPPGLRRFDAKSFQGNKNLCGPPVGAPCPEVPILASPSPSP

LSSSWWSPRSLKILMIIALVVVVVGALLAFAGALTAMLARRREATTETQGGGVGGAAANAAAARMKATPNPAVTV

AHGGGGGGGEQQPHVTVSAVPAKRGGRRDDHGRLVFIQEGRERFELEDLLRASAEVLGSGSFGASYKATLVEGQS

MVVKRFKEMNGVGRQDFNEHMRRVGRLVHPNLLPVVAYLYKKDEKLFVTEYMVNGSLAHLLHGGSSMAALDWPRR

LKIIKGVTRGLAHLYDELPMLTVPHGHLKSSNVLLDAAFEPILSDYALVPVMTPRHAAQVMVAYKSPECGETGRP

SKKNDLWSLGILILEVLTGKFPANYHRQGRTGTDLAGWVHSVVREEWTGEVFDQEMRGARGGEGEMVKLLKVGLG

CCESDVDKRWDLRDALARIEELRERDAGAGADDSSAASSVASGGGGGEASRSHSS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	175	199	0.084
LRR [Pfam ls]	200	223	1.4
LRR [Pfam ls]	245	265	2.4
Ser/Thr pkinase [Pfam fs]	426	622	8.1e-16
Ser/Thr pkinase [Pfam ls]	426	694	3.4e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	152	174	1.7
LRR [sensitive, ls]	152	174	39
LRR [sensitive, ls]	175	199	0.0036
LRR [sensitive, ls]	175	199	0.084
LRR [sensitive, ls]	200	223	0.06
LRR [sensitive, ls]	200	223	1.4
LRR [sensitive, ls]	245	265	0.1
LRR [sensitive, ls]	245	265	2.4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	147	698	2e-24
FLS2 [A.thaliana]	150	262	9e-11
Cf-9 [L. pimpinellifolium]	154	264	1e-10
FLS2 [A.thaliana]	156	276	9e-13
Pto [L. esculentum]	418	638	5e-24
Rpg1 [Hordeum vulgare]	427	697	4e-12
Rpg1 [Hordeum vulgare]	431	620	3e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	15	37	out -> in
putative TM domain	15	37	out -> in
putative TM domain	313	335	in -> out
putative TM domain	313	335	in -> out

Report for 3775.m00191

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)