Report for 3783.m00146

 > 3783.m00146, length: 540, copies: 1 

MDVHKKLLLASLSCVLLIQVASSDGTAEGVGTTSWTCVCTAHPLGEPNSNSSLSSNCSSSCHCLQGISQEGKKHV

SNKTVIVTLLVCVILTTIAFLGTTAYYLRRKDALSPHSHAYSFDKYTSWSSRSNLVSHRSSPLPQPKPKPRISVL

KEFLCSCNPICGNEGGPLPGVIVRFSYSELEQATGKFSDEHLIGVGGTSKVYRGQLSDAKVIAVKKLRPLGGADE

DFEFLSEVELLSRLNHCHVVPLLGYCMESQGRQLERLLVFECMGNGNLRDCLDLKQGRKAMDWATRVGVALGAAR

GVEYLHEAAAPRILHRDIKSTNILLDDKFRAKITDLGMAKCLMNDGVTSCSSSPARMLGTFGYFAPEYAIVGKAS

LKSDVFSFGVVILELITGRQPIHHHRPPAAAGESLVLWAAPRLRDSRLVVAELPDPALQGRFPQEEMQIMAHLAR

ECLQWEPESRPTMSEVVQILATIAPSSRKHAAAATLVTRIGRSSSAGDTMHSTRLAVKCSVGESWRSPEMEEETV

VDLTEPRLEPAIFFN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	187	468	6.1e-46
Ser/Thr pkinase [Pfam ls]	187	469	3.8e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	167	468	3e-24
FLS2 [A.thaliana]	174	467	3e-34
Pto [L. esculentum]	174	467	5e-43
Rpg1 [Hordeum vulgare]	175	473	2e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	80	102	in -> out

Report for 3783.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)