Report for 38.m00173

 > 38.m00173, length: 651, copies: 1 

MAAVVEGVGWPEPELEALRDERGGLVALRDALRSGRDLHSNWTGPPCHGGRSRWYGVACDGDGRVVGVQLDGAQL

TGALPAGALAGVARLETLSLRDNAIHGALPRLDALARLRVVDLSSNRFSGPIPRGYAAALGELTRLELQDNLING

TLPAFEQDGLAVFNVSYNFLQGEVPDTRALRRFPATAFAHNLRLCGEVVRTECRREGSPFDAAPAGGGGSGSDGG

DRVFGARDAAAPPARWRKPIRFRIARWSVVVIALIAALVPFAAVLIFLHHSKKSRVVRLGGGDIKDKAAEQAGKK

VSSGSGNGSRSTTESGKGAADQLQFFRPEKATFSLDELFRSTAEMLGKGRLGITYRVALHAGGGGGGGGGPVVVV

VKRLRNMGHVPRKDFAHTMQLLGKLRHENVVEVVACYFSKDEKLVVYDHVPGRSLFHLLHENRGEGRTPLPWPAR

LAIAKGVARGLAYLHQTLPLFHRPPHGDLKSSNVLVVFPGPGGRGGGGGDAVPVAKLTDHGFHPLLPHHAHRLAA

AKCPELARGRRRLSSRADVFCLGLVLLEVVTGKVPVDEDGDLAEWARLALSHEWSTDILDVEIVADRGRHGDMLR

LTEVALLCAAVDPERRPKAHDVVRMIDDIAAGSAAAAGDGEATAGRELALR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	89	111	3.3
LRR [Pfam ls]	137	159	5.4
Ser/Thr pkinase [Pfam fs]	340	512	2.8e-15
Ser/Thr pkinase [Pfam ls]	340	626	1.5e-14
Ser/Thr pkinase [Pfam fs]	529	623	0.0072

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	64	88	3.4
LRR [sensitive, ls]	64	88	78
LRR [sensitive, ls]	89	111	0.14
LRR [sensitive, ls]	89	111	3.3
LRR [sensitive, ls]	112	136	0.28
LRR [sensitive, ls]	112	136	6.5
LRR [sensitive, ls]	137	159	0.23
LRR [sensitive, ls]	137	159	5.4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	12	176	2e-12
FLS2 [A.thaliana]	75	623	9e-16
Pto [L. esculentum]	306	623	1e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	252	274	in -> out

Report for 38.m00173

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)