Report for 3804.m00137

 > 3804.m00137, length: 956, copies: 2 

MAETAITTVLAKVAELVAWEAAVLLEVGDDVRLLRDKLEWLHTFIRDADRRRRRRDDEFVAVWVRQTRDVAFEAE

DALDDFLHRAARRHRQATPLAAMLLPSCAAAAAAWPPRCAGQVALRHGLSGRIRQIRKRLDEISANRAAYNIEHT

PSPAWATHPSSAAATALAAWDDFEEYTVGFDKYSNMLKEQLIDDAVTGRAIVSIVGESSIGKTTLGRKVYQSPEV

RNHFEIRTWTVLPPKCRPADVLRDIYRQASSQLRRSPSQQSADDGCGADAAVAACRSSGKDVGNLLFRNLTGRRY

IVVVDGSIAASDWNSLRASLPDEGNGSRVVLITDMAGLEVVTYAAGPTMNSPIKLERLSPENTYEVFRRRVFGRG

GDCPRQHRSRYYQKIFQITRGLPLSIVVLAGVLRSKEPPAEWDEVMSQLATAREPSSSSSKNGNSGRIMSLAFDD

LPHHLKSCFLYFAAMRESATVDAQRLVRLWVAEGFVRPRRGSTMEEVGQGYLKELISRCMVQLVDKDEFGVVQTV

VVHDRLHAFAQDEAQEASFIESHDSTDVLAPATVRRLAVQNSSERYVHLSNALPKLRSVVCDLVDGRNGGGGGGK

CIHCTDLGFLHASKFLRVIDIHGLELKKLPNEIGSMIHIRYLGLQCGQLEKLPPSVSNLVNLQSLILKGRNAGHV

LDVTAAFWRITTLRHVVAPFALPKVLGDLHSLQTLHGVQHLCWDTRGGGGGGGNPLGTSTNLRSLELSGLLAKHA

AALTAALESLDLLVHLMLDGESLPSTVFTIPSLRRLQSLKLRGSMDSPEGPGGDDDDDNESADDGVVRYIRPNLT

RLSMWSTMVGQKFVDMLGELPSLAELTLMVAAFDGERLEFRDGGFRSLQKLKLGLPELEEWTVKAGAMASLARLT

LFGCLKMRMLPEALAGIPELEEVVLYRMPIMVERIKKHGGEDHHKVKHVPVIQTIW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	157	491	1.5e-30
NB-ARC [Pfam fs]	177	234	2.3e-06
NB-ARC [Pfam fs]	312	491	3.2e-31
LRR [Pfam ls]	638	660	9.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	615	637	0.9
LRR [sensitive, ls]	615	637	18
LRR [sensitive, ls]	638	660	0.47
LRR [sensitive, ls]	638	660	9.2
LRR [sensitive, ls]	823	852	7.9
LRR [sensitive, ls]	823	852	160
LRR [sensitive, ls]	895	918	2.7
LRR [sensitive, ls]	895	918	53

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	1	953	2e-55
Mla1 [Hordeum vulgare].	5	713	5e-35
Pib [Oryza sativa].	41	367	6e-12
Pi-ta [Oryza sativa]	57	792	8e-38
Pib [Oryza sativa].	174	707	1e-27
I2 [L. esculentum]	187	712	7e-30
Xa1 [Oryza sativa]	187	575	7e-21
RPS2 [A. thaliana]	199	668	4e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3804.m00137

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)