Report for 3806.m00149

 > 3806.m00149, length: 1270, copies: 1 

MANPWRIAAVGWGVTVVGWLIAPIMNLLVNKFVSYIGFNASRKLRELEIHTLPKLEDMLRELEEQRMQKEAEDDR

SAVKKLEQPCEELRSALYEAEDILDLIDYHQIKNKVNDCDDDINWLHYLQDAVGACIKLCTSKSAALFPISRPPP

DSTDPNCSSKSAALLPISRSPLDTPAPDPNCSSSKSASAAPLPISRPPPDTTDPFPLEGVDIVPSLQRVRSFYQL

ACFYRNWSYEVMGITNYKGSDSFLTICAKRKLRKRIEAIEEILNDWKHLCTESHQSHLSNQERSSRWNTISSNYR

QSIKPVTKPTVFGRDEEREVIHRILREGPDDHAASSSNRSGKTTLAQYVCDYEKEDKDKYFDPIILIHVSETLRA

DYIFHDMLEEITENRHSSITDRRELQNKLKKELRGKRFLLVLDDVNDKNDQEQRDLLSPLDVGKRGSRILVTARR

TDVALRANRYIQISDLDKEIYFSMFMHYALEGTSFDDRDFIPLGRKIAEKLQRSPIAAVIVGVRLKQNPDITYWR

ATSNLDVLNSTTGALLWSYQQLDMDVRRCFEFYSIFPRRYELERERLISMWIAQGLVKTTNAREEDMEDVGELYF

HELQVCSFLQLKRKVNSDTSSGEYFTAHDSLYDVAKMVAGSDRVEIKKGIVQHISKYVRHVCIMFYDEVFPEQIL

ELANLRTLIMCYSIKEMSKNDFERVLMRLRKLRVVYLDLQDMRTVPACIGELKHLRYLGISPSLNYNDITLPAEF

AKLYHLHEFSVTPFVNLQFSSPAKMGNLVNLRYMHTWKGLDIPNIGRLKSLRNLFRFTVRKEKGYEIHQLEYLNN

LRGRMFIDCLDNIRSKEEAVRARLADKRHITDLTLSWGGDERSASRTAPVTEMSSGPELQMQAEVLEELHPPAWI

TSLCIREYNGTTYPSWLSVKGVVQQGEFPAALQILMFWSCKGSNNPPMIGVCKLKTGSEGLGILNLEKFARALRL

RWLWQEWKSPEKAWVGSGTPCDDTDKLLFAAATSITIGNGATVSFWESAWWQERRMKDVAPLVYAVSKKKNSTLQ

HALQSDQWLLDLGFPADVGWTTELIDQLVTVWTAIQTIELTEHEDDQISWKLTSHGQYTATSAYNAQLLGTTANN

LIWKPWALRKCKTFAWLVIQNRVWTSDRLSTRGWPNGSICPLCRRVQETALHLLAGCRYTKRIWATLAEWTACNN

IHPNHWWQVSSVLEWWDQTTSVKEAPKKALRSLTFLVVWEIWNERNRRTFQHKELPPSGLLTKIKDEAKI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	290	587	1.4e-21
NB-ARC [Pfam fs]	340	500	2.6e-18
NB-ARC [Pfam fs]	528	587	1.1e-10

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	240	918	5e-60
RPS2 [A. thaliana]	252	586	4e-11
Xa1 [Oryza sativa]	254	917	1e-57
RPM1 [A. thaliana]	261	812	4e-28
Pib [Oryza sativa].	300	791	2e-18
Mla1 [Hordeum vulgare].	341	804	2e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	54	83

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 3806.m00149

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)