Report for 3835.m00130

 > 3835.m00130, length: 898, copies: 2 

MSIGFLNVDCGLTNRSTYNDTDTTLTYVSDREFVESGKSYDIMAQYMADATNEQEKTLRSFPDGQRNCYTLPTNS

SKKYLIRATFTYGNYDGLNSSEKGSLFIFGLHIGVNFWTTVNLTKWDPSSTVWKEVITVAPDKSVSVCLINMGSG

TPFISTLDLRPLQDTMYPFVNASTSVSYFSRIRFGSVDEYITRFPTDQYDRFWEGWVFTMHTFPWVNKSSNGKVA

ELPNIDTFGLPPAILGSASTINGNFSWLNISVSASNSLATDLELLPVFHFVELGNNGSKRIFDIYNVDEPQALFS

NFSPPSFLSSMFHNWFLRKGRRAYFQLRKTPDSQLPPLINAYEVYSRVQVENFTTASSDVDSMKTIKEKYMVIKN

WNGDPCSPREYIWNGLTCTYPNGGQNPRIVEINLSGSGLQGELEISFMKMSSLKKLDLSHNNLTGTIPDYQVNSL

TVIDLSNNQLNGSIPDSILQRYKAGLLELRLEGNPICSKVRASYCGNKKNTRTRILLISVLVPVTSLLVVLFIFW

RLCWKGKSRKSEEEDYDMYEEETPLHIDIRRFTYAELKLITNNFQSIIGKGGFGTVYHGILENNDEVAVKVLVET

SIAESKDFLPEVQTLSKVHHKNLVALVGYCQNKKCLALVYDFMPRGNLQQLLRGGYDSLNWEERLHIALDAAQGL

EYLHESCTPSIVHRDVKTPNILLDKNLVAKISDFGLSRAFNAAHTHISTVAAGTLGYLDPEYHATFQLTVKTDVY

SFGIVLLEIVTGQPPVFMDPQTVHLPNWVRQKIANGSVHDVVDKKLLDQYDATHLQTVIDLAMNCLENASIDRPS

MTEVVSVLKVCLPISSERQSATSTPRKKNVMDAEIPRQFQLMISGASTTSYEGSSFQSGYTGGVSEISHISGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	427	448	0.2
LRR [Pfam ls]	449	473	0.021
Ser/Thr pkinase [Pfam fs]	567	765	5.7e-51
Ser/Thr pkinase [Pfam ls]	567	835	4.4e-49

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	403	426	0.56
LRR [sensitive, ls]	403	426	11
LRR [sensitive, ls]	427	448	0.01
LRR [sensitive, ls]	427	448	0.2
LRR [sensitive, ls]	449	473	0.0011
LRR [sensitive, ls]	449	473	0.021
LRR [sensitive, ls]	475	499	4.2
LRR [sensitive, ls]	475	499	84

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	373	465	4e-11
Xa21 [O. sativa]	399	669	7e-20
FLS2 [A.thaliana]	404	833	2e-54
Rpg1 [Hordeum vulgare]	555	833	1e-39
Pto [L. esculentum]	556	837	4e-52
Rpg1 [Hordeum vulgare]	557	830	9e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	505	527	out -> in

Report for 3835.m00130

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)