Report for 3840.m00227

 > 3840.m00227, length: 369, copies: 2 

MALMKRCFCGSQEDIKELLNLKNVQLFSYREIRAATNNFDDGNKIGRGGFGTVYKGTFEDGTAFAAKVLSAESEQ

GINEFLTEIESITEAKHANLVRLLGCCVQRQNRILIYEYVENNSLDNALQGSAAGVTDLSWSTRSDICMGVAKGL

SYLHEEHEPSIVHRDIKASNVLLDRNYIPKIGDFGIAKLFPDNVSHVSTRVIGTTGYMAPEYVVHGQLTKKADVY

SFGVLILEIISGRRMSQTIRSGMFLVRQAWMLHEQGSLLDMVDPSMKGGYPEEEALKFIKVALACTQAKPCSRPT

MRQVVKLLSRPVCLEELEMLCPGFVGDGHTHDAAAADTVGSPGVMVVSPALSPKVRWPTGTATTTTTEH

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	39	237	7.7e-51
Ser/Thr pkinase [Pfam ls]	39	308	6.8e-49

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	3	124	4e-11
FLS2 [A.thaliana]	11	310	1e-40
Rpg1 [Hordeum vulgare]	14	309	4e-36
Pto [L. esculentum]	27	316	4e-57
Rpg1 [Hordeum vulgare]	27	310	1e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3840.m00227

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)