Report for 3841.m00143

 > 3841.m00143, length: 1182, copies: 1 

MKSTQRFWLRNNAAADSELERSFHLGQKAVGTIIGIYEYKTTRESHSMNSKMIRLFAPFPKFIPLLAVFIISCSL

PLAISDDTDTDREALLCFKSQISDPNGSLSSWSNTSQNFCNWQGVSCNNTQTQLRVMVLNVSSKGLSGSIPPCIG

NLSSIASLDLSRNAFLGKIPSELGRLGQISYLNLSINSLEGRIPDELSSCSNLQVLGLSNNSFEGEIPPSLTQCT

RLQQVILYNNKLEGSIPTRFGTLPELKTLDLSNNALRGDIPPLLGSSPSFVYVDLGGNQLTGGIPEFLVNSSSLQ

VLRLTQNSLTGEIPPALFNSSTLTTIYLDRNNLVGSIPPITAIAAPIQYLSLEQNKLTGGIPASLGNLSSLVHVS

LKANNLVGSIPKSLSKIPTLERLVLTYNNLTGHVPQAIFNISSLKYLSMANNSLIGQLPPDIGNRLPNLEALILS

TTQLNGPIPASLRNMSKLEMVYLAAAGLTGIVPSFGSLPNLHDLDLGYNQLEAGDWSFLSSLANCTQLKKLALDA

NFLQGTLPSSVGNLPSQLNWLWLRQNKLSGTIPSEIGNLKSLSVLYLDENMFSGSIPPTIGNLSNLLVLSLAQNN

LSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDFSHNSFGGSLPSEVFNISSLSQSLDLSHNLFT

GPIPLEIGNLINLGSISISNNRLTGEIPSTLGKCVLLEYLHMEGNLLTGSIPRSFMNLKSIKELDLSCNSLSGKV

PEFLTLLSSLQKLNLSFNDFEGPIPSNGVFGNASRVILAGNYRLCANDPGYSLPLCPESGSQSKHKSTILKIVIP

IAVSVVISLLCLMAVLIERRKQKPCLQQSSVNMRKISYEDIAKATDGFSPTNLVGLGSFGAVYNGMLPFETNPVA

IKVSDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYDFKALVFQYMPNGSLEMWLHPEDHGHGKKR

FLTLGERISLALDIAYALDYLHNQCVSPVIHCDIKPSNVLLDLEMIAYVSDFGLARFMCANSTAAPGNSTSLADL

KRSIGYIAPEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDL

DGGNSELMQSCLLPLVKVALMCSMASPKDRLGMAQVSTELHSIKQAFLELSSGGKVV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	154	177	3
LRR [Pfam ls]	178	201	2.7
LRR [Pfam ls]	202	225	0.017
LRR [Pfam ls]	226	249	0.23
LRR [Pfam ls]	250	273	0.0081
LRR [Pfam ls]	274	296	4.2
LRR [Pfam ls]	298	321	0.073
LRR [Pfam ls]	322	344	6.9
LRR [Pfam ls]	346	369	1.6
LRR [Pfam ls]	394	417	4.5
LRR [Pfam ls]	418	442	0.49
LRR [Pfam ls]	443	466	8.1
LRR [Pfam ls]	490	516	7
LRR [Pfam ls]	517	540	7
LRR [Pfam ls]	542	565	0.2
LRR [Pfam ls]	566	589	0.16
LRR [Pfam ls]	590	613	0.028
LRR [Pfam ls]	614	637	1.9
LRR [Pfam ls]	638	662	0.21
LRR [Pfam ls]	687	710	1
LRR [Pfam ls]	711	734	0.083
LRR [Pfam ls]	735	758	0.22
LRR [Pfam ls]	759	784	5.8
Ser/Thr pkinase [Pfam fs]	873	1092	8.7e-39
Ser/Thr pkinase [Pfam ls]	873	1133	2.6e-33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	154	177	0.14
LRR [sensitive, ls]	154	177	3
LRR [sensitive, ls]	178	201	0.13
LRR [sensitive, ls]	178	201	2.7
LRR [sensitive, ls]	202	225	0.00082
LRR [sensitive, ls]	202	225	0.017
LRR [sensitive, ls]	226	249	0.011
LRR [sensitive, ls]	226	249	0.23
LRR [sensitive, ls]	250	273	0.00039
LRR [sensitive, ls]	250	273	0.0081
LRR [sensitive, ls]	274	296	0.2
LRR [sensitive, ls]	274	296	4.2
LRR [sensitive, ls]	298	321	0.0035
LRR [sensitive, ls]	298	321	0.073
LRR [sensitive, ls]	322	344	0.33
LRR [sensitive, ls]	322	344	6.9
LRR [sensitive, ls]	346	369	0.075
LRR [sensitive, ls]	346	369	1.6
LRR [sensitive, ls]	370	393	0.76
LRR [sensitive, ls]	370	393	16
LRR [sensitive, ls]	394	417	0.22
LRR [sensitive, ls]	394	417	4.5
LRR [sensitive, ls]	418	442	0.024
LRR [sensitive, ls]	418	442	0.49
LRR [sensitive, ls]	443	466	0.39
LRR [sensitive, ls]	443	466	8.1
LRR [sensitive, ls]	467	489	0.66
LRR [sensitive, ls]	467	489	14
LRR [sensitive, ls]	490	516	0.34
LRR [sensitive, ls]	490	516	7
LRR [sensitive, ls]	517	540	0.34
LRR [sensitive, ls]	517	540	7
LRR [sensitive, ls]	542	565	0.0098
LRR [sensitive, ls]	542	565	0.2
LRR [sensitive, ls]	566	589	0.0076
LRR [sensitive, ls]	566	589	0.16
LRR [sensitive, ls]	590	613	0.0014
LRR [sensitive, ls]	590	613	0.028
LRR [sensitive, ls]	614	637	0.091
LRR [sensitive, ls]	614	637	1.9
LRR [sensitive, ls]	638	662	0.01
LRR [sensitive, ls]	638	662	0.21
LRR [sensitive, ls]	663	686	2.3
LRR [sensitive, ls]	663	686	48
LRR [sensitive, ls]	687	710	0.05
LRR [sensitive, ls]	687	710	1
LRR [sensitive, ls]	711	734	0.004
LRR [sensitive, ls]	711	734	0.083
LRR [sensitive, ls]	735	758	0.011
LRR [sensitive, ls]	735	758	0.22
LRR [sensitive, ls]	759	784	0.28
LRR [sensitive, ls]	759	784	5.8

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	65	655	4e-79
CLV2 [A. thaliana]	68	800	4e-74
FLS2 [A.thaliana]	88	1169	1e-157
Cf-9 [L. pimpinellifolium]	106	791	5e-71
Xa21 [O. sativa]	115	387	7e-28
Cf-9 [L. pimpinellifolium]	121	335	2e-14
Cf-9 [L. pimpinellifolium]	276	801	9e-34
Xa21 [O. sativa]	276	984	1e-153
Xa21 [O. sativa]	540	765	6e-29
Rpg1 [Hordeum vulgare]	810	1168	4e-25
Pto [L. esculentum]	854	1165	2e-24
Rpg1 [Hordeum vulgare]	870	1087	2e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3841.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)