Report for 3878.m00214

 > 3878.m00214, length: 532, copies: 1 

MAVWGGLGQAATVAQLVGADVGGLISSIIQAAATARQNKRECDQLARRVVMIADLLPHLQDPEVMRRPEVRRPLA

ELGDTLREAHELVASCQGRSAAYRFVMAGRLADRFRDVQSKIDSYLIVFPFIAHIDITRRLDQIYRILAPNDTAA

ASSSSSAGSSQSDQIYNILVSNDTTAASSPSSAGSLQSPDALEFARISQGDGGEEFTVKELVAATNNFANEIGRG

SSGSVYKGRLRDGREVAIKSLVKTSPDHGREESLMRGLAILSRLRHDHIVRLLGFCVVREKKRESTLLLSFRKKK

KAAAERQAGELLLVYDYMENGSLADQLHGHLSSSSSSSPVMASWKMRIKMLLGVSRGIQYLHHGATTTPIIHGDI

KLSNILVDSSWVPHLTDFGAAVINGMERPSTVVHGTAGYIDPEFYSTMNQTRSSDVNSFGVVMLEMLTGKRPIFI

DRKEEGEVTNLVAFSLPIIEDGELGRLLDRRPAEPTARQLEALEMVARTAARCVQLQRKERPAISEVVAILETEL

DLLLRDG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	216	518	1.5e-27
Ser/Thr pkinase [Pfam fs]	221	447	6.5e-33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	173	518	1e-27
FLS2 [A.thaliana]	204	521	5e-32
Rpg1 [Hordeum vulgare]	205	518	1e-22
Pto [L. esculentum]	206	527	1e-43

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3878.m00214

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)