Report for 3879.m00115

 > 3879.m00115, length: 484, copies: 2 

MGLLSSASRSCCCCSWVRGGCASCCSWIRGFCGGGGGATTSAQDTAASDAKKRKKRKWVVRGVFGKAAREAEEPL

TLETMKKRKSAATSPELEKNKWGTKKNWKKKKGKTQPTGLASLVKEISLENSTRNRAAAGEILRIGNHNIPSRVF

TFRQLADATGSFSPENLLGEGGFGRVYKGFIPDTKEVIAVKQLDKDGLQGNREFLVEVLMLSLLHHPNLVTLLGY

STECDQRILVYEYMPLGSLQDHLLDLTPNSSPLSWHTRMKIAVGAARGMEYLHEIANPPVIYRDLKASNILLDGG

FNAKLSDFGLAKLGPVGDKSHVTTRVMGTYGYCAPEYAMTGKLTKMSDIYSFGVVLLEIITGRRAIDTTKPTREQ

ILVHWAAPLFRDKKKFVKMADPLLDMKFPLKGLYQALAISSMCLQEEASSRPLISDVVTALTFLADPNYDPPDDV

EPLPIKAPNLDRESSQKEAEGGDNDSDEGGEEQV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	162	374	1.2e-49
Ser/Thr pkinase [Pfam ls]	162	438	4.9e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	142	438	2e-50
Rpg1 [Hordeum vulgare]	146	365	1e-20
Rpg1 [Hordeum vulgare]	147	451	5e-32
FLS2 [A.thaliana]	150	436	1e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3879.m00115

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)