Report for 3900.m00170

 > 3900.m00170, length: 704, copies: 1 

MRGAARLLLPLVVLLLHAARGSAGSTGGGGNGSCTQSCGRMRVPYPFGFSRGCTVQLGCDDASGTAWLGGTRGLG

LLVSNVTPRAIVLTLPPNCSRPLNESLDALFTDNYAPTAQNALVVSSCDPQAAARLSNCSIPPEAYLEKSCNSIR

CVLPSTKANVDGTNVTDPFLNRSEMRRLGSDCRGLVSASIYSNTAGPALQLTALELDWWVQGRCGCSSHAICDGF

TPPSTQKEAFRCECQEGFEGDGYTAGAGCRRVPKCNPSKYLSGSCGKLVQIGLLVAGVFFGAMVMGITCLVYHLL

RRRSAALRSQKSTKRLLSEASCTVPFYTYREIDRATNGFAEDQRLGTGAYGTVYAGRLSNNRLVAVKRIKQRDNA

GLDRVMNEVKLVSSVSHRNLVRLLGCCIEHGQQILVYEFMPNGTLAQHLQRERGPAVPWTVRLRIAVETAKAIAY

LHSEVHPPIYHRDIKSSNILLDHEYNSKVADFGLSRMGMTSVDSSHISTAPQGTPGYVDPQYHQNFHLSDKSDVY

SFGVVLVEIITAMKAVDFSRVGSEVNLAQLAVDRIGKGSLDDIVDPYLDPHRDAWTLTSIHKVAELAFRCLAFHS

EMRPSMAEVADELEQIQVSGWAPSTDDATFMSTTSSLCSSAPSRCTDKSWGTAKSKRQAAANAVVKQETTKCAVA

DSPVSVQERWFSDRSSPSSNSLLRNSSLN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	339	536	2.2e-51
Ser/Thr pkinase [Pfam ls]	339	618	5.1e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	247	617	9e-32
Xa21 [O. sativa]	254	427	4e-11
Rpg1 [Hordeum vulgare]	290	696	8e-32
Pto [L. esculentum]	317	614	4e-52
Rpg1 [Hordeum vulgare]	327	618	2e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	278	300	out -> in

Report for 3900.m00170

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)