Report for 3921.m00113

 > 3921.m00113, length: 752, copies: 1 

MRYFIVIDDLWGTEEWKSIRLALFNNKCGSRIITTTRSAAVASFSCCDGGYVYLMEPLNFADSKRLFLKRAFGSE

ELLYPHLEEVFHGILEKCGGLPLAINTISSLLVDQHAKEEWDRMLTAIGSALAKNPDVENMTKILSLSYLDLPHH

LRTCLLYLSVFPEDYVIDKQQLINRWIAEEFIHEEQGRSTYEVGERYFLDLIDRSLIQPVDVKYGQVEACRVHDI

ILDFIACKAAEENFVTSLDTADFGQVSDRRVRRLSVMNISEDHATISASQIDLSHIRSLTLFGRFMQTPLVDLPA

IRVLDLEECENMGDNHPILANVETLLHLKYLRIGMLCPITELPRNIGELRHLETLDMRFACQVKELPSTITRLQR

LARLYVHHNTRLPDGVIGKIQNLEELEEFGVVSCEKGKSLQEFGQLPKLRTLKVRCSSTTDDLEGRKRAEDLWNY

IGTLISSCNLHHLCILHRQDDPDHLPMSLESWCPPSDNCSLRKLHITHYYISKLPSWMGSLANLKELLLYFYRMR

PEDVDILEAIPSLVLLRVRTLYSSNGRITFRGNKGFRCLKYFSLDIDLCGTELEFEAGAMPKIEHLKINFPVHSW

TASVNGASDFGIQHLSTLTEVEVGLGCFFIPDTRRMYHPTTEDTDDSPMEDDGEANVVKCFESRIKSAVEALPNR

PTCKFNLNTAIVPCPSKKNNGECFEYKRKHPSFPVGSVKAVRDVRISSSAIQDNSMGLRRRRPANQPFRFGWAGL

QY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	1	187	1.2e-08
NB-ARC [Pfam fs]	2	187	2.6e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	2	547	7e-32
RPM1 [A. thaliana]	2	593	7e-45
RPS2 [A. thaliana]	2	556	1e-21
Mla1 [Hordeum vulgare].	2	627	6e-90
Pi-ta [Oryza sativa]	2	356	2e-55
Xa1 [Oryza sativa]	2	449	3e-28
Pib [Oryza sativa].	5	382	1e-49

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3921.m00113

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)