Report for 3931.m00167

 > 3931.m00167, length: 1110, copies: 1 

MAAEAILGAFMQTLFQKLSEATLDHFISWRGIHGKLESLSSTLSQLQAFLDDAEEKQLTDASVRGWLAKLKDIAY

DLDDLLDSYSAKSMRMKQRQVIFPTKASFLSSSFLSRNLYQHRIKHKINIILERLDKIAQERDTIGLQMICEMRR

YDTSERPQSSSLVDSSAVFGRERDREEMVRLVLSDNGHNSCNLCVIPVVGMGGLGKTTLMQMVYHDDRVREHFDL

RIWIYVSESFDERKLTQETLEASDYDQSVASTNMNMLQETLSRVLRGKRYLLVLDDVWNEDLDKWHSYRAALISG

GFGSKIVVTSRNENVGRIMGGIEPYKLQKLSDDDSWSVFKSHAFRDGDCSAHPELEAIGMEIVKKLKGLPLASKA

LGSLLFCKTDEEEWKDILQNDIWELPADKNNILPALRLSYNHLPPHLKQCFAFCSVYPKDYMFRREKLVKIWLAL

GFIRQSRKKRMEDTGNAYFNELLSRSFFQPYENNYVMHDAMHDLAKSISMEDCDHLDYGRRHDNAIKTRHLSFPC

KDAKCMHFNPLYGFRKLRTLTIIHGYKSRMSQLPHGLFMKLEYLRVLDMHGQGLKELPESIGNLKQLRFLDLSST

EIETLPASLVKLYNLQILKLSDCNFLREVPQGITRLINLRHLEASTRLLSRIHGIGSLVCLQELEEFVVQKRSGH

NVTELNNMDELQGQLSIRGLNNVPNGQDAVCAKLRNKEHLRTLHLIWDEDCESNPSEQQEVLEGLQPHLDLKELV

IKGFPGVRFPSWLASSFLPKLQTIHICNCRSTRLPALGQLPFLKYLVIAGVTEVTQLSSEFTGFGQPKGFPALED

LLLEDMPNLSEWIFDVADQLFPQLTELGLIKCPQLKKLPPIPSTLRTLWISESGLESLPELQNNSCPSSPTSLYI

NDCPNLTSLRVGLLAYRPTALKSLTIAHCEGLVSLPEECFRPLISLRSLHIYECPCLVPWTALEGGLLPTSIEDI

RLNSCTPLASVLLNGLSYLPHLRHFEIADCPDINNFPAEGLPHTLQFLEISCCDDLQCLPPGLHNISSLETLRIS

NCPGVESLPKEGLPMGLNELYIKGCPQIKQQCQEGGEYHAKIAHIRDIEIDGDVIVPEQI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	152	458	7e-93
NB-ARC [Pfam ls]	152	458	1.9e-93
LRR [Pfam ls]	568	590	1.1
LRR [Pfam ls]	591	610	1.1
LRR [Pfam ls]	869	890	1.6
LRR [Pfam ls]	1019	1042	1.9
LRR [Pfam ls]	1043	1064	1.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	568	590	0.055
LRR [sensitive, ls]	568	590	1.1
LRR [sensitive, ls]	591	610	0.057
LRR [sensitive, ls]	591	610	1.1
LRR [sensitive, ls]	614	637	0.56
LRR [sensitive, ls]	614	637	11
LRR [sensitive, ls]	638	659	4.3
LRR [sensitive, ls]	638	659	85
LRR [sensitive, ls]	869	890	0.079
LRR [sensitive, ls]	869	890	1.6
LRR [sensitive, ls]	894	918	1.9
LRR [sensitive, ls]	894	918	38
LRR [sensitive, ls]	920	944	0.65
LRR [sensitive, ls]	920	944	13
LRR [sensitive, ls]	945	976	5.1
LRR [sensitive, ls]	945	976	100
LRR [sensitive, ls]	996	1017	1.9
LRR [sensitive, ls]	996	1017	37
LRR [sensitive, ls]	1019	1042	0.094
LRR [sensitive, ls]	1019	1042	1.9
LRR [sensitive, ls]	1043	1064	0.054
LRR [sensitive, ls]	1043	1064	1.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	5	1079	1e-165
Mla1 [Hordeum vulgare].	6	642	3e-52
RPM1 [A. thaliana]	31	642	3e-63
Pib [Oryza sativa].	46	339	7e-14
Pi-ta [Oryza sativa]	60	664	9e-35
Xa1 [Oryza sativa]	159	1072	1e-110
Pib [Oryza sativa].	164	618	2e-43
L6 [L. usitatissimum]	176	1058	2e-18
M [L. usitatissimum]	176	1080	1e-15
N [N. glutinosa]	195	498	4e-14
RPP5 [A. thaliana]	195	1079	1e-18
RPS2 [A. thaliana]	195	889	2e-38
RPP5 [A. thaliana]	385	1055	1e-10
Xa1 [Oryza sativa]	530	1083	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3931.m00167

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)