Report for 3935.m00162

 > 3935.m00162, length: 229, copies: 1 

MSTLLAHLVRREGFGELAVHLVQQLLELFRLGRMGREALNCQPNDVSHFGASGMNGTESRSKLLDWIFTDIHWEY

DLPEGTTVDSAPLTLALSYNVSAPTMLALSSNPRYIDSCGLSGDLPLTLSKLKNLRALRASDNDFTGKIPDYIGN

LSNLEVLKLQGNKIEGPIPASLSKLVKLNSSLTLRNCNISDKLTSVDFSNFKNLTDLDLSYNMLSGRFPAWVSTK

NLNV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	129	152	0.39
LRR [Pfam ls]	153	176	0.017
LRR [Pfam ls]	203	225	2.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	129	152	0.015
LRR [sensitive, ls]	129	152	0.39
LRR [sensitive, ls]	153	176	0.00065
LRR [sensitive, ls]	153	176	0.017
LRR [sensitive, ls]	203	225	0.094
LRR [sensitive, ls]	203	225	2.5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	95	219	9e-12
Xa21 [O. sativa]	113	220	1e-10
CLV2 [A. thaliana]	117	219	4e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3935.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)