Report for 4003.m00131

 > 4003.m00131, length: 628, copies: 2 

MTATYFVLPRRDNGDGDPILSRHSSSSDDPILARIDEERGLNLLSGNLYGAILDSLVPHAHGPFLAPRQQHPKFC

KIDTMVEEMQMDLRTLHRYGGDGDDDGHGDGEDEDDVLDLDHIELCSFMEQIKSAVQLVRAALQEKVMRMTTNTR

GGEDDDGGGDEAFPSGSGHLKSVLESLDPQLKQCALCLAVFPSGKAIKRRLLIHWWIGEGIVRSAAAGKACFQDL

LSRGLLQPAMLRPHCHTAHYCRVHPSVRDLLVAAARSFSYFAFDRDGEPTDECLPGTTRRVTLCRTRGSSRHGGG

GGEYVTVYNLSQRYLEMDEAWLGEQRGMGTLQLGRWQTSPEHHVEMVRPDGVLGAAAAAACRNLRYLSLRGISLV

ESLPESIGDLRDLVVLDLRACHNLETLPASMASLGKLEYLDASECYLLDQMPHGVCKLHRLQVLKGFVVASAAGG

KKIPPCRLADLAALPLLRKLSVSTGRQLPVAPDDELPRLHGFAALESLSVRWGAAAAHAGGGGRMDLSLLPRLAK

LDLRRVPAEELQEVVHPARGGGLRKLCVRGGRLRAFGDDVTWDVVETLRVRFLERLDCEWRQLRSTFGKLRFVDK

RRCPKLSSWRCDAQGIWRREEDDGGDRN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	175	217	1.9e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	363	386	0.34
LRR [sensitive, ls]	363	386	11
LRR [sensitive, ls]	387	410	0.47
LRR [sensitive, ls]	387	410	15
LRR [sensitive, ls]	411	434	0.71
LRR [sensitive, ls]	411	434	22

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	168	417	5e-15
Mla1 [Hordeum vulgare].	176	445	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4003.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)