Report for 4127.m00173

 > 4127.m00173, length: 942, copies: 1 

MQLVLLSIIASTVMLVASGAPPPTAASLAPCPKTCGEVNIWYPYGIGPGCFRQGFELTCDTTSKPLKLFLGNTMT

QVISLYPSGTVLASIMYTIPMIHGVDTYNLSWDSPGRNLNVETYNYLAFLGCGIGVYLFHPDTGNLVGHCTIKCA

SMEEMHMATEGGICNGMGCCTVTFPVLFRGFRVTIVKSNETIPQPFNNITIKAFLTFRPYIFSIADLLSNKINAS

TIGASMAYLSTVIADEPNCPTARLDNKTQFACGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKN

CSRSCGSTNIPFPFGLEPGCFAKRRFQLSCASNRTLIGRPPAKYEVTNISLDEGLLYVNKLSEFEDANTKYLSVY

YGGSGYFGQQLIYGLEKSDLSEEYGVWKWSVTNLTCEDAKSKSAYACVSTNSECLDVTHGKLYIGYRCKCSLGFE

GNPYVQNGCTGAWRYGISEESDMLSNDFHSVEVVVNILMNALYQTIVMGHVITLKEAIVVVLMNNFSIAAITPVG

LAIGISSGFGVLALTLIAAILFKRWKRSTRKKIRRAYFRKNKGLLLEQLISSSNNVTPNTRIFSLEDLEKATNNF

DPTRILGYGGHGTVYKGILSDQRVVAIKRSKIVEQSEIDQFVNEVAILSQIIHRNVVKLFGCCLESEVPLLVYEF

ISNGTLHGLLHGDLSTNCLLTWDDRMRIALEAAGALAYLHSSAAMPIFHRDVKSTNILLDGTFTTKVSDFGASRS

ISIDQTRVVTIVQGTFGYLDPEYFYTSQLTEKSDVYSFGVILVELLTRKKPIFLNCLGEQKNLCHCFLQSLRDKT

TMDILDSQVVEEASHREIDEMASVAEMCLKTKGAKRPKMKEVEIRLQLLRAARSRAYKEDLQRSSEIKPLLTPKY

KCTSLNSTKNVEMGLVANPESQVVSRCYTMEREMMYSSQFPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	600	803	5.8e-40
Ser/Thr pkinase [Pfam ls]	600	873	4.2e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	575	872	4e-51
Rpg1 [Hordeum vulgare]	585	923	2e-30
FLS2 [A.thaliana]	588	892	1e-38
Rpg1 [Hordeum vulgare]	588	871	8e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	496	518	out -> in
putative TM domain	525	547	in -> out

Report for 4127.m00173

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)