Report for 4127.m00184

 > 4127.m00184, length: 669, copies: 1 

MFFHLHARARRRKNFITRLQDGDQLAVSHDELQELASSHFGAILGTSVERDFALDLHSLGLCPAHLGGLDNPFSE

EEVWAVVKALPSDKAPGPDGFTGRFYKTCWSVIKPEVMAALNSLFLANGRGFSSLNDTLISLLPKKDEAVDVKDF

RPISPIHSFGKLFSKIPASRLSPHLGELVAPNQSASSKADPFHDNFRYVQLAARALHAKHIPRLLLKVDIAKAFD

TGDPLSPMLFILVMDVLNTMLRKASESGGFLPLNDHASLYADDLVLFLSPSVLSSIPVHVSMVIGLPAWMIKAIN

KKRRAFLWTGNPYWDGLKAPAERAVTDMFQASTFFVPGDGRGASLPTFTGCRGSVDVKIRGLGDLLNSSAGPKLA

FGYASVPVDLILQSTRNKDKETAMLADYRLDSDIAGDYDRLVWRWTSDQRYSAHSAYQAFFLGQHSFACVDLLLN

AKGPAKCKFFLWFAFQQRCWMADLLQKRSIDSHSTCPFCAQELETANHILLDYVFARQAAPVAGEVFKIAIGIAK

ALEYLHNGSITQSVIHGDVKSSNILLSEDFQAQLCDFGLAKQVSASTPRLTCTDITGTFGYLAPEYFSHGKVNEK

IDVYAFGVVILVLEIISGRRHIRTGCAKGQESLVGWAKPLLSSGEIKQLVDPFLGNDYDCDEMERMMLD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	436	654	3.6e-09
Ser/Thr pkinase [Pfam fs]	515	613	5.8e-22

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
Reverse transcriptase (RNA-dependent DNA polymerase) [fs]	129	226	3.9e-08
Reverse transcriptase (RNA-dependent DNA polymerase) [fs]	227	272	3.9e-05

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	509	613	9e-11
Rpg1 [Hordeum vulgare]	517	611	1e-13
Pto [L. esculentum]	518	656	2e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4127.m00184

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)