Report for 4133.m00183

 > 4133.m00183, length: 490, copies: 2 

MPGDLRNCFLYCSMFPEDYSMSRESLVRLWVAEGFVVRKDGNKPEDVAEGNLMELIHRNMLEVVENDELSRVSTC

KMHDIVRNLALDVAKEEMFGSASDNGTMTQLDTEVRRFSTCGWKDDSAPRVSFPHLRTLLSLQAVSSSTSMLNSI

FSGSNYLSVLELQDSEISEVPTSIGNLFNLRYIGLRRTNVSKLPECIENLSNLQTLDIKQTKIVKLPRGIVKVKK

LRHLIADRYADEKRTEFRYFIGVEAPKGLSGLEELQTLETVQASKELAEQLEKLTKLQNLWIDNISATNCAKLFT

ALSKMPLLSSLLLSACDEKEVLCFQNLNPISKMFHRLIVRGQWATGTLELPIFQEHGKNLRYLALSWCQLGEDPL

RVLGLHVPNLTYLRLNNMNSANRLIITAGSFPKLKTIVLKLMPNVNRLKIADDALPVIEGLYIDSLAGLERVPVG

IENLFSLKKLWLLNLHQDFKADWIHREMHRKMQHVPDLRV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	4	41	1.5e-13
LRR [Pfam ls]	179	201	2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	156	178	1
LRR [sensitive, ls]	156	178	11
LRR [sensitive, ls]	179	201	0.18
LRR [sensitive, ls]	179	201	2
LRR [sensitive, ls]	202	225	0.53
LRR [sensitive, ls]	202	225	5.8
LRR [sensitive, ls]	359	382	2.4
LRR [sensitive, ls]	359	382	27

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	234	2e-17
RPM1 [A. thaliana]	1	465	1e-58
Mla1 [Hordeum vulgare].	1	229	2e-18
Pib [Oryza sativa].	1	236	1e-24
Pi-ta [Oryza sativa]	1	229	8e-14
RPS2 [A. thaliana]	5	448	2e-20
Xa1 [Oryza sativa]	5	231	1e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4133.m00183

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)