Report for 4133.m00191

 > 4133.m00191, length: 522, copies: 2 

MSTAQMAEAVLLALTKISDALADEITKELIVKLSEKVNNLKDLDEKIEQMRKQLTTMNNVILQMGMIYLTDEVVK

GWIGEVVKIEKEIKQVIELKDQWLHPSQLVSDPLTEMGRQRSRDSFPELVKDEDLVGIEDSRRLLTEWLYADELD

SKVITVSGMGGLGKTTLVTNVYEREKINFSAHAWMVVSQTYTVDALLRKLLRKVGYTEPPLSCNIDKMDVHDLKE

EIKRMLKGKKCLIVPDDVWDQEAYFQIRDAFQNDQGSRVIITMRKNHVAALASSTCHLDLQPLSDIHSFDLFCRM

AFYNIKDHECPTELMKFAKSIVERCQGLPLAIASIGCLLSSRSRSHYVWNQSYNQLRSELSKNNHVRAILNMSYH

DLSGDLRNCFLYCSLFPEDYPLSRESLVRLWIAEGFVLKKENNTPEAVAEGNLMELICRNMLQVTKYDELGRVNT

CRMHDIMRDLAFSAAKEEKFCRNMNSAIIKRGSARDLKVDGCGDKGFRQVQALSMRGNTLLLFGDLNPPGVL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	114	417	5.8e-68
NB-ARC [Pfam ls]	114	417	1.6e-68

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	27	467	5e-41
Mla1 [Hordeum vulgare].	33	489	2e-39
M [L. usitatissimum]	117	510	2e-19
L6 [L. usitatissimum]	124	505	7e-17
Pib [Oryza sativa].	126	518	4e-43
RPM1 [A. thaliana]	127	471	9e-53
RPS2 [A. thaliana]	128	468	2e-22
Pi-ta [Oryza sativa]	130	470	2e-28
Xa1 [Oryza sativa]	153	468	4e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	32	61

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4133.m00191

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)