Report for 4168.m00135

 > 4168.m00135, length: 884, copies: 1 

MDIVVSVSHGALGPLLGKLNTLLVDECARLKGVHREIRSLRSELSNMHAALHKYTSLEDPDIQVKTWTSELRELA

YDIEDCIDKFMHQLGANDDQHHTSNGVKDFFGKSAKRLKTLGSRHNIAAEIEELKMRVISVRDQKNNYKLDDIFC

SSSSNTNAFVDPRLAALFAEENHLVGIDSPRDELVNWLDADSRLIKHRKVDKAGLGKTTLANEVYRRVKIHFDCP

AFTSVSQKPDMKKIFKDIIYHMPTKDAFLKDIDTWNEKKFIEKLRELLVDKRYLVIIDDVWSISAWKAISVVFPE

NGSSIIIVTTRISDVGRSCCLNGIDRNFEMEPLSEIHSRRLFCQRIFSTDEDGCPDILQEVSTDILKKCGGIPLA

IISISGLLSNRPIIKEEWEKVKESIGFVLDKNQNLEGMKSILSLSYNDLPNYFKACLIYLCIFPEDYIIETNMLL

RRWIAEGFVSEDCGMNLEDVAESYFCELVNRSLVQPVDIRFDSKARACRVHDIMLELITSKATEENFITLLRGQT

RKTNLHGYVRRLSIQDTDNDLSSLLVNKDLSHVRSLTCFGGNMNLLPQLARFEAIRVLEFEGSMNLEQYDLENTD

KLFQLKYLSLRGSDISHIPRQIAKLQNLLTLDISETFVEELPTELCLLKKLLHLFGNSLKLPDGIGNMRNLQVLT

GINISNSSASTVPELGELTSLRDLKISLSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIYNSSDDLLERWFPIP

CFLRLFRMSTNHFLPQLPKWIKPSLTKMAYLNINLREIKEEDMETLGDLPALLCLEIWLEPNPKKQLTVQSTGFP

CLKEFLLVCGDHDGGAYLTFGKGAMPKLEKLEIPFHVLMAKSHGFYFGINNLLRLKEVF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	159	464	1.5e-52
NB-ARC [Pfam fs]	203	464	7.8e-53
LRR [Pfam ls]	604	626	0.31
LRR [Pfam ls]	627	649	4.6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	18	41	2.4
LRR [sensitive, ls]	18	41	57
LRR [sensitive, ls]	604	626	0.013
LRR [sensitive, ls]	604	626	0.31
LRR [sensitive, ls]	627	649	0.2
LRR [sensitive, ls]	627	649	4.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	882	1e-137
RPM1 [A. thaliana]	16	883	2e-69
Pi-ta [Oryza sativa]	31	696	1e-86
I2 [L. esculentum]	37	807	1e-43
Pib [Oryza sativa].	169	858	6e-63
Xa1 [Oryza sativa]	200	739	5e-32
RPS2 [A. thaliana]	259	696	1e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4168.m00135

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)