Report for 4180.m00162

 > 4180.m00162, length: 503, copies: 1 

MASDAIVSGVVADMVGRLMSLVAGQLRDRRGDAEEKLRRLRRLVVRIESAVEAAEARRITGRALLAWLSELVDGA

LQGRYFLDAFPVATDHDGGGRGEAAVANPLNPAKRLRVAARRLVFWDGGAAAELDGVLADLESVSGDLTGFITML

QSCPPALHRPLNTNIYADNQMFGRQVERRRVFDFLLHDSDGDGGGEPAGAELAVLSIVGRQGLGKTTLVQHVCND

LEVRRRFSLIIELDFHCLSLMAAGETALLLRSMFAGTGGAASATTTSVFGDSGETLALLERRLRGVRRRVIDAIM

PTLRRGRRGSKVIVTSRHAEHVAGLAAAAADTITLRPPPPAEYWLFFKAHAFGGADAEADPRLVAAGQAIAKRLR

LAASFFGGKMLAALLRSRPDPRFWRTVLSSGAADLPCLGYADDAVAGRLFPPHVTLQSVTMSRSPERGIVSLQDS

CLVTPPATQSGDHCRRRRSPELPVLLCKSVFPSYCIYYTAHCTISDSDTDNKQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	154	463	6.9e-08
NB-ARC [Pfam fs]	156	236	2.4e-10

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	133	411	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	32	55

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4180.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)