Report for 4201.m00155

 > 4201.m00155, length: 1295, copies: 1 

MTELAPGAVSALLVVIRNEAVLLRGVRDDVQTIKEEMESMDSFLAHLARSAPPGGEHNEQVRTWMNQVRLLAQDC

KNCIDLYLYYSGNKDIYRAKGRLQRGLWWVYWSMRKMVAQHRAAVQLSQLKDRARGVGDRRLRYGVEVPATTKAA

AAPDAAGGFAAGDDGGEDCEDQLAVATVIHHSARRAVFEAPTLDDYLKAKLLEWIEEIPGGATETLSMAIVVPNA

HNKEVIALAHETLVAPNYYRRSIIVNVPAMHLDSLPLRPKEVLYYILQELMRAKVAGSQKQATDQGQWEEDPDPW

KDYVKKCGNHRSKKRMLRKIKRKIEKMKIYEKFEKIKSDIQDGQQKGDKTLLLQLQKKGVHRVDLHVLLQLLLFQ

SQQDQASAVDMYKLSEWNGSIIMKIARKLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEE

GKEKELKGRKDKEKKEKGGREERKEEEHHEKQEKEKEEERKEEGQNEEKEGRKEVGEEEKEDDDDDYDDDDDYDD

DDYDDNEEEKKYDDDDDDDDDDDDPIHLHTAQYMQILQEVFLKTISCKAQQQERLAAKQATKTATTTLDEERIKQ

MINEAKQDILRELQGGKPDKNQATGEHTSVSDQNEQAYFEEIEQMIEEFKRKLKDQLKIKGVVDKIKHHLQGECP

LIILKVDKMMDGSRWEEIRKALSLLECSADALIFTTESTEQAKGYCYPPREPIDYSLVGLYHYTVLEITSKQINE

DNYNPQIFRDILEKCEGHEFCMKIFTHALYANPKRSNKELSKLHSTLQASHKSLDAIAKTMFMYSYNDLPKEYKS

CLLYLAIFPKGEKIRRSTLVGRWVAEGLTFREDWPSSVRQANRCFDALICRWLVCPADIGATGKIKSCVVGDPVH

GFITTIAKKQHIMHTRLSHHLARHFSIFNDLQVRSSDRIDTFFQNLSRSSQVSLLKVLDLESCQCFGGKNQRYLK

DICSKMLLLKYLSLKGTDITQLPSEINYLSELEVLDIRETKVPANATVKVLLLKLKRLLAGHIDPSPSNFGSSVR

IPRRIDKMINIEVLSNVKAQRHDDLEDIGKLWQLKKLGVVIDKKSHLVNLLKAISDLHECLLSLSITIPTATPEG

SPSILELPDDIGSCLRHHANILESLSISGAMHLFPLLTKGGNNKLAKVTLCSTPLNQDDLEVLAKLPKLQCVRLQ

HISCTGSVLIFKEDDFKCLKYLLIEGFNLTNVTFEDGSACELEKMVLSSTTIESISGVDGLPKFEELELNNSPVP

NEVKEAIENNKRINLKCNEP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	583	859	2.4e-05
NB-ARC [Pfam fs]	813	859	1.6e-11

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	642	1091	4e-21
RPM1 [A. thaliana]	645	1289	2e-21
Mla1 [Hordeum vulgare].	662	1238	4e-27
Pib [Oryza sativa].	665	1270	2e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	436	457
putative coiled-coil	479	505
putative coiled-coil	633	660

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4201.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)