Report for 4231.m00147

 > 4231.m00147, length: 1239, copies: 1 

MVEAAAIAFAKSSAIFVGKKVAETVISYVVNKALDRLPLENEDLKTKLKSKLSKTQAMLYGITLQEIQDNQGLVE

WLWQFRDAIQEAEDALDELDFFDLEKVCNRKAESSSSLVPKFMRLQLSVSSNNSNSSRKNLKNALMRLESVFDDA

ANFRVVTGHGLHTSPQRNEGRIQDTTNRNETTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSKLSVCAIVGGGGM

GKTSLAQLVCQDKKVQDHFGDMIIWVHVPKRFEPVVLVARMLESINRNRVTASSLDILQLDLTKELVTKRFLLVL

DDAWEDGENELWGQFLSPLRNIIAPMGGRILLTTRMGSVADAVKRQMPSNEYKCVVLGGLDHRDIMQILNHHVPP

NEDLELRSVAEWIVHNLEGCPFVAKVIGQYLRDNTDHSNWNDFLNKKVCHLDDIAPRVMEMLRLSYEDLTSEVQL

CFQYCSIFPSHYKFRMEELTEMWVSSGLILQSTKGNSGQEKIAREHFNILLKKSFFSLIPRELHPDPSTDYYVMH

DLIYELSCLVSSEEFSTFKVTKCNTADVSERVRHLYIEGINSEAINVISKSKYLRTLIIANEEWPLKAGLADNLK

KAMKGITSLRLLKFDGHGWFDINDAIAELKHLRYICMSATNKSNLNKLFKLFHLEVLKLLKIEGEEQASVSDLCN

LANLQKLYLPKPALSRVPHIGRLTNLRELNGLSVKKEEGHKISELKDLKNLRKVFVFDVENVSNCSEASLAELSN

KNDMELLSLEWSNQHNRINERILDTVVPYKRIRHLRISGYKGVLPPLWIRRKVLTKLVRLKIVGCPKWDDLPSFA

SLSSLKHVLLEDLPNLKCIGGPDGDGLPPFLVTLVVKECLELLNLPHLPYSLKHLGINKVGISCLPTSSQMALQN

VSTVDPQLCSLHVDSCPNLLSFGSCIVEEQHYKALTSLKVIGCSMLEKLPSEEHFRRISTMESIEILQCQSLSTL

GGLGALASLKILKIQQCTHLTATSSGIPVAPAMRSSLVLDTLEIDDHLLLLQNPFRNFCLTRRLVSNGSEMLELP

QEWLLQNSSQLEHIEINNANLLRSLPSTMDTLHSLRSLVLCNAPLLETLPAMPPNLWALQISGCCTRLKAREYSI

SPLEEKMVPNSSGLIWQAGVVLTHKKCASIRGWLGLCCSTPMESLPSWWCDARKAIKKRDRRAFDAGIILVTWLI

WKQRNARVFEGHTVLPVNLCAAIEDEWKLWQEAGLTSSL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	173	344	1.2e-19
NB-ARC [Pfam ls]	173	484	1.9e-29
NB-ARC [Pfam fs]	413	484	3.6e-12

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	17	1114	4e-77
RPM1 [A. thaliana]	81	663	7e-24
Xa1 [Oryza sativa]	132	992	2e-72
Pib [Oryza sativa].	171	813	1e-20
Mla1 [Hordeum vulgare].	186	764	1e-21
RPS2 [A. thaliana]	189	889	6e-18
Pi-ta [Oryza sativa]	191	726	2e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4231.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)