Report for 4231.m00151

 > 4231.m00151, length: 930, copies: 1 

MAEAAAVFAGKAVVQPAITYLVKKIVDRIPDGDLCKRLQQKLPFVEAILYAVDRQQTLSNPSLSEVVWQLRDAIQ

EAEDALDTLEFLDLKSSANNRSKVSLSSLLSSISRKFHVADSSRATENLKDALKNLDAVLDNAGRSLPAIYPSSC

SHGKAHIQDSASIQEVTKELRTTIFGRLKEKDAIIDWLGVLTPNIRDQKLSLCAIVGAGGMGKTTLAQFVCQDKK

VQDHFANKIIWADVSKIFDPKVLVRKISGSFNRYKASADGLDTIMTDKFLLVLDDARDDAQSERWQQFLDLIRKN

APMGGKILLTTQIRPVANAVEGQMPPDTYKCLELGGLDQENTLKLFNHHAFGDLSPSDCFELQLIGEQIARKLKG

CPLLARTIGRHLQGNTDHARWNTILNHDIHKVDDVATEIKKVLRLSYESLSNEVQVCFRYCSIFPPHYKFKMEEM

VEMWKLHLPKTTVSRIAQIGSLTTLRELNGFSVKRTDGHKITELKDLRKLQKVIVLDVQNVIDHTEASDAELDKK

SDLKVLSLEWCADQASCDGRILNKLVPDSNLKHLVISGYNGTRPPLWMESKYFSNLVYLKLDGCVEWDKLPPFGY

LWTLKHLFLKNLPKLEYIASSSYSTVVYGYRDTSPDVLPPHLITFVVKNCLGLSELPSLPFSLRYLDIDRVGMSS

LPTMCTHMGRRRVSLVESQLSILNVESCNLLVSLNGFLQEEHCRVLTVLSLVCCHMLISLPDASDFKRMSKLESI

RIIECNRLSSLGGLEALSHLKILRIEHCANLVTTSSRLPPASDESTYLKLETLEIDDHQLLAISPIRNLCLTKKL

IILEREKMAELPLEWLLQNRSHLEHIEISNAELLKSLPNMHEWHTLRSMLLHNTPLLQSLPLMPPNLWVLDINGC

CNELHGECQSGGSEWSKICRIHSCNITPKI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	158	253	3.5e-11
NB-ARC [Pfam ls]	158	465	3.2e-16
NB-ARC [Pfam fs]	408	455	1.1e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	580	602	2.3
LRR [sensitive, ls]	580	602	52
LRR [sensitive, ls]	662	684	2.3
LRR [sensitive, ls]	662	684	52
LRR [sensitive, ls]	694	722	2.9
LRR [sensitive, ls]	694	722	65
LRR [sensitive, ls]	746	768	2.3
LRR [sensitive, ls]	746	768	52
LRR [sensitive, ls]	769	796	2.2
LRR [sensitive, ls]	769	796	49
LRR [sensitive, ls]	799	820	1.8
LRR [sensitive, ls]	799	820	39
LRR [sensitive, ls]	847	869	1.1
LRR [sensitive, ls]	847	869	26
LRR [sensitive, ls]	870	893	3.1
LRR [sensitive, ls]	870	893	70

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	10	454	3e-38
Mla1 [Hordeum vulgare].	52	454	5e-12
RPS2 [A. thaliana]	159	886	2e-19
Pib [Oryza sativa].	174	614	1e-11
Xa1 [Oryza sativa]	174	454	1e-35
RPM1 [A. thaliana]	204	454	2e-14
I2 [L. esculentum]	446	804	1e-17
Xa1 [Oryza sativa]	464	877	4e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4231.m00151

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)