Report for 4231.m00152

 > 4231.m00152, length: 1269, copies: 1 

MEEALDWSFCEPLLTVAISLMDRALFYFGGVKEKEKGSKKRFGGVDKEKILERLGHVRAIFDEFRHLVLTNLKIP

FSYNLKEIWSFRIDIEGFEHWIEEIEYRGLVGQGRHPTFNILKAKITNKFAKSPDSYAIREGLDHLMRLADIAAR

IRYLRFEISVSSSRTTTPVAVGRGREKEDIEVVSRGREKEEIQLFGREREKEQIVQWLIKQPAENSESEIFSTDH

IRLFAILGVAGMGKTALAKVACQEPIVSTIFDFVVWVQVPYDFTTETIAKIIMETVTSVSPEYYSLKFLQHALTG

KRLLLVLDDTWEDESVKKWEALVATLSNCKRGSSILLTTRMQSVVDMAAEAVGSPAECLELDELGKSDNLLLFMS

RLPSQVHSEGYYHLRLIGEQIAENTGGCPLVTEKVASWLGSCVENHHWNAVLQKGWQKLGLNAIFASSRLSYERL

PSELQICFRYFSIFPKGYKFNKVELANMWISSGLIPFGLSKQDDTGLQHKKAAYLFSAEDVGEQYFAALVRKSFF

CRLLETDPSNGNMKEYYVLHNLMHDCAQFVARNECARVDDNNFQDVRRTTVHLSIAHCGSLRAIPPITNLRTLII

QSEFCLDQEAELMLGEVLRKSARLRLLYLDVPSLSNALDEIPSLTQLRYLFLFSCDKSHIRSILKLCHLQVFKLK

YFTGKQADLDGIRNMRFLRCLHVPDSMLSKILKTGMPTTLQELQEFEVAKNDGHMLSALSTLTNLKRLSLRNLQN

VRNCKDAMEIKLKDKPDMMFLSLSWNKHSNDPEDIDHQIIDNLEPNKGIQQLHVYGYNGVQLPVWIETSFLIHLV

SLELQYCMEWRTLPSFKELSSLKYLKLEHLFQLGSVIEEQSGSIESDNAFLPPLLNTLIVRWCPNLKKLPALPCT

LEKLIIRHVGLAVLPRLHQAYASTCESLSVDSRLSLLHIESCAHLTSLDGLLDQQQHLQHLKTLLVRHCAKLCHL

PANGFTELHHLNFLEIVACPMLRNVKTDSNLFPTSLNNLDINPCCHIEASVLMSLPNLTYLRRLSLVSCSSVEKL

PSDEVFRTLKNLNDMLIARCESLLSLGGLGAAASLRTLSILYCDKIYSSSSPQAGCSFMLWKLKVDREAMLLVEP

IKSLRYTLELHIGDDYAMDSLPEEWLLQNASSLRLIEIGVAKNLQTLPTQMEKLVSLQSLHIEKAPRIQFLPKLP

FSLNKLTIWGCDPRFLKLYERNVGSDWGKIENIDHVDMKAYSEGALSFYSELLSFPCNNQLYVIVSLIN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	178	363	1.9e-17
NB-ARC [Pfam ls]	178	490	6.3e-28
NB-ARC [Pfam fs]	392	490	2e-13
LRR [Pfam ls]	960	984	6.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	574	596	0.44
LRR [sensitive, ls]	574	596	9.9
LRR [sensitive, ls]	646	670	4.3
LRR [sensitive, ls]	646	670	97
LRR [sensitive, ls]	823	845	3.8
LRR [sensitive, ls]	823	845	86
LRR [sensitive, ls]	933	956	2.4
LRR [sensitive, ls]	933	956	54
LRR [sensitive, ls]	960	984	0.28
LRR [sensitive, ls]	960	984	6.3
LRR [sensitive, ls]	1035	1057	3.2
LRR [sensitive, ls]	1035	1057	72
LRR [sensitive, ls]	1181	1207	1.8
LRR [sensitive, ls]	1181	1207	41

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	36	748	1e-18
I2 [L. esculentum]	90	1259	2e-73
Pib [Oryza sativa].	190	581	3e-15
Pi-ta [Oryza sativa]	193	650	3e-15
Xa1 [Oryza sativa]	194	1162	1e-71
RPS2 [A. thaliana]	228	895	2e-13
RPM1 [A. thaliana]	230	917	7e-24
Xa1 [Oryza sativa]	823	1211	5e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4231.m00152

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)