Report for 4246.m00131

 > 4246.m00131, length: 593, copies: 1 

MLGVEKERKIWIEMGPITIVVSTLKYEYAIEKLKSTGFGILERCGGLLVAIKAIAGLLNHKEINKIEWGKYQVLH

GFVNGKSNEPEELGKEYYNELIIRNLIQAMPNSEWSMHDVGRSFCQHLAKDEALSSQMGQLRVSDILKWREYEIA

STLKDEYAIEKLKSTGFRILERCGGLPLAIKAIAGLLNHKEINEIEWGKVLRSPSWLVDGMPEEINHAIYLSYDD

LDPHLKQCLLYCSLFPKYGKPNKHLIVEVWISEGFVNGKSNEPEELGKEYYNELIIRNLLQTMPGDNNNWTMHDV

VRSFCRHVAKDEALPFHMEHLRVTDLDSNRYRWLCIQNELDWSAWQEQNSVRTLFFYGSTHIKLKANDLCSKFSN

LRVLSIVYAQLATFDSLCQLKNLRHLYFSRTDIRSLPDGIGKMKFLEYIGITCCEQIQQLPGSIIKLERLRSLNL

MGTNIKSIPRGFGRLTSLRTLYSFPAQMGSSSSKDEWCSLEELGPLSQLRDLHIKGLENVSASSSAAKAMLGAKK

HLAIWWLECTDRQRDDGFLKEEGIISIDEQRRIKEVFDELCPSYCLEQLYIRGYFGWQLPKWMTSKAS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	5	267	9.2e-09
NB-ARC [Pfam fs]	166	267	3.7e-25
LRR [Pfam ls]	397	419	0.057
LRR [Pfam ls]	444	466	0.096

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	350	374	4
LRR [sensitive, ls]	350	374	90
LRR [sensitive, ls]	375	396	0.65
LRR [sensitive, ls]	375	396	15
LRR [sensitive, ls]	397	419	0.0025
LRR [sensitive, ls]	397	419	0.057
LRR [sensitive, ls]	420	443	2.1
LRR [sensitive, ls]	420	443	48
LRR [sensitive, ls]	444	466	0.0043
LRR [sensitive, ls]	444	466	0.096

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	86	588	5e-39
RPS2 [A. thaliana]	128	450	1e-16
Xa1 [Oryza sativa]	130	590	2e-25
Mla1 [Hordeum vulgare].	132	504	1e-25
Pib [Oryza sativa].	141	473	6e-18
RPM1 [A. thaliana]	160	590	2e-29
Pi-ta [Oryza sativa]	169	499	2e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4246.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)